Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0035 ATGGCTCAAACAACACCAAATCACACTCAAACTGTTTCTGGTTGGGCAGCTCATGATTCTTCTGGCAAGATTACCCCATACACCTTCAAAAGAAGAGAGAATGGTGTTACTGATGTAACTATCAAGATTTTGTATTGCGGAATTTGTCACACTGATATTCATCATGCTAAAGATGATTGGGGCATTACTATGTACCCAGTTGTTCCCGGGCATGAGATAACAGGGGTTATCACAAAGGTTGGGAGTGATGTATCAGGATTCAAAGAAGGAGAGAGAGTTGGTGTGGGGTGTTTGGCTGCTTCATGTTTGGATTGTGAGTTTTGCAAAACAGATCAAGAAAATTACTGTGAAAAATTGCAGTTTGTTTACAATGGAATTTTCTGGGATGGTAGCATTACATATGGTGGCTACTCACAAATGTTGGTGGTAGATTACAGATATGTAGTACACATTCCGGATAGCTTACCAATGGATGCAGCAGCACCATTACTGTGTGCTGGAATAACAGTTTTCAGTCCTTTGAAAGACCATAATCTGGTATCAACACCTGGGAAAAGAATCGGTGTGGTTGGTTTGGGAGGACTTGGTCACATGGCTGTTAAATTTGCAAAAGCTTTTGGTCACCATGTTACTGTCATAAGCACTTCTCCTTCCAAAGAAGCCGAAGCTAAGAAACGTTTGGGAGCTGATGATTTCATAATCAGCACTAACCCCCAACAATTGCAGGCTGGAAAGAGAAGTTTAGATTTTATTCTGGACACTGTATCAGCAGACCATGCTCTATTGCCTATCTTAGAATTGCTCAAAGTTACCGGAACCCTATTTCTCGTGGGCGCACCCGACAAGCCACTACAATTGCCTGCTTTTCCATTGATATTTGGGAAGAGATCCATAAAAGGTGGGATCATTGGAGGAATAAAAGAGACACAAGAAATGTTGGACGTTTGTGGAAAACTGAATATAACATGTGACATTGAGTTAATCAAAGCTGATACAATCAATGAGGCTTTTGCTCGTCTTCTCAAGAATGATGTTCGCTACCGTTTTGTCATTGACATTGCTGATGCTTTTGCTACCACCAAACATGTCTAA 1092 0.4103 MAQTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGVTDVTIKILYCGICHTDIHHAKDDWGITMYPVVPGHEITGVITKVGSDVSGFKEGERVGVGCLAASCLDCEFCKTDQENYCEKLQFVYNGIFWDGSITYGGYSQMLVVDYRYVVHIPDSLPMDAAAPLLCAGITVFSPLKDHNLVSTPGKRIGVVGLGGLGHMAVKFAKAFGHHVTVISTSPSKEAEAKKRLGADDFIISTNPQQLQAGKRSLDFILDTVSADHALLPILELLKVTGTLFLVGAPDKPLQLPAFPLIFGKRSIKGGIIGGIKETQEMLDVCGKLNITCDIELIKADTINEAFARLLKNDVRYRFVIDIADAFATTKHV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0035 363 Gene3D - 15 353 - -
Psa6g0035 363 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 357 - -
Psa6g0035 363 SMART PKS_ER_names_mod 19 363 IPR020843 GO:0016491
Psa6g0035 363 PANTHER ALDEHYDE REDUCTASE 1 357 - -
Psa6g0035 363 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Psa6g0035 363 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Psa6g0035 363 CDD CAD1 14 352 - -
Psa6g0035 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Psa6g0035 363 SUPERFAMILY GroES-like 17 180 IPR011032 -
Psa6g0035 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Psa6g0035 363 Gene3D - 166 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0035 Psa-Chr6 1167946 1170521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0035 14 357 Monolignol Biosynthesis Gene Families AT2G21890 57.267 3.41e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0035 K00083 - gmx:100820588 622.468