Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0019 ATGGGAGATACAGAGAGTTGCAACAATAGAGGTTTGAATATCAATTATCATGGTCCAATTCAGAGTCTCAAAATTGAAGTTTACAACGACATTCTCACTCGACTCGTGGAATTGAATGCTCCTGAGGCCACTCTTCCTCATTTTCAAGACGAACTTTGGCTTCACTTCAATACCCTTCCAACTAGGTATGCGCTGGAAATGAAGGTTGAAAAGGCTCAAGATGTTCTTATGCATAAAAGGTTACAGAATATGGCAAGAACTGTTGCTAGTAGACCTGCAATTGAAGTTCGTCTTCTCCAGGTTCGCTCTCCTTCTGGTGTGCATTCTAGCAAATCCCTTCATTCCAACTTACAAACACAAATCAGTTGCCAAGTCTCTGATTTTCCATGCAACATGAGACCAATGCATGAAATCACAATTTCAACCAGCGATAAGCCAAAACTTTTCAGTCAGTTGACTACCTTACTCTCTGAGATTGGTCTGAACATTCAAGAAGCACATGCTTTTTCCACATTGGATGGATATTCATTGGATGTTTTTGTTGTTGATGGTTGGGCAGGCCAGGATACTGAGAGACTCAAGCATGAAGTGACAAAGAAAATGCAGAAACTCGAGAAAAATCAGTGGTTTCCCTTGTCTCCTTTTCCCAAGGAGACCGAGATACTAAAACATATTCCAACAAAGAAAATTAAGAAACTCGAGAAGCAACCCTGGTGCAGTCTTCCTAAGGAGAAACTAGAGAAAATTGGGATGAACTGTAAACCCATCAGTAGAAATTATGTATGGGAAATTGATGCAAGCTATTTAAGATATGAGAAGAAAATGGCCTCTGGATCAGTCAGTGATTTGTACAAAGGCACTTATATTAATCAAGATGTGGCTATCAAAGTCTTTAAGAATGGTAGTCTGAATGGAAATACACAGAGGGAGTTTTCTCAGGAAATCTTTATCCTGAGTAAAGTTCAGCACAAGAATGTTATCAAATTTATTGGTGCGTGTACAAAACCAAACTTTCATCTTGTGACAGAATATATGTCTGGCGGAAATATGTATGACTTTCTGCATATACAGAAGAGCGTACTTACTCTTCCTTCTTTGCTCAAAGTAGCAATTGATGTATCGCAAGGAGTGAAATATCTGCATCAAAACAACATTATACATCGAGACCTCAAAACTGCCAATCTTTTGATGGATGAGAAGGGGGTAGTTAAAGTTGCTGATTTTGGTGTAGCTAGATTGCAAGATCAATCTGGTATCATGACTGCAGAAACTGGAACATACCGGTGGATGGCTCCAGAGGTTATTCAACATAAGCCATATAATCACAAAGCTGATGTTTTCAGCTTTGGGATTATTCTTTGGGAGCTTCTCACAAGAAAGCTTCCTTATGAAGATTTGTCCCCATTGCAAGCAGCAGTTGGAGTAGTACATAAGGGATATCATATCGATTTGAGGCCTGAAATTCCAAGGGATGCACATCCAAAGTTAGTGGAATTGCTTCACTGGTGTTGGCATAAAGATCCGTCTTTAAGGCCCGAATTCTCAGAAGTTCTTAAGTTTCTACAGCACATGAACAGCATGATTGCAGGGAAAAAGAAGAAGGTAAAGGTTAAGGCAAAGGGAACACATAAACATGACAAGATATAG 1647 0.3947 MGDTESCNNRGLNINYHGPIQSLKIEVYNDILTRLVELNAPEATLPHFQDELWLHFNTLPTRYALEMKVEKAQDVLMHKRLQNMARTVASRPAIEVRLLQVRSPSGVHSSKSLHSNLQTQISCQVSDFPCNMRPMHEITISTSDKPKLFSQLTTLLSEIGLNIQEAHAFSTLDGYSLDVFVVDGWAGQDTERLKHEVTKKMQKLEKNQWFPLSPFPKETEILKHIPTKKIKKLEKQPWCSLPKEKLEKIGMNCKPISRNYVWEIDASYLRYEKKMASGSVSDLYKGTYINQDVAIKVFKNGSLNGNTQREFSQEIFILSKVQHKNVIKFIGACTKPNFHLVTEYMSGGNMYDFLHIQKSVLTLPSLLKVAIDVSQGVKYLHQNNIIHRDLKTANLLMDEKGVVKVADFGVARLQDQSGIMTAETGTYRWMAPEVIQHKPYNHKADVFSFGIILWELLTRKLPYEDLSPLQAAVGVVHKGYHIDLRPEIPRDAHPKLVELLHWCWHKDPSLRPEFSEVLKFLQHMNSMIAGKKKKVKVKAKGTHKHDKI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0019 548 PRINTS Tyrosine kinase catalytic domain signature 342 355 IPR001245 GO:0004672|GO:0006468
Psa6g0019 548 PRINTS Tyrosine kinase catalytic domain signature 379 397 IPR001245 GO:0004672|GO:0006468
Psa6g0019 548 PRINTS Tyrosine kinase catalytic domain signature 425 435 IPR001245 GO:0004672|GO:0006468
Psa6g0019 548 PRINTS Tyrosine kinase catalytic domain signature 492 514 IPR001245 GO:0004672|GO:0006468
Psa6g0019 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Psa6g0019 548 SMART serkin_6 269 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0019 548 SUPERFAMILY Protein kinase-like (PK-like) 258 526 IPR011009 -
Psa6g0019 548 Pfam Protein tyrosine and serine/threonine kinase 270 521 IPR001245 GO:0004672|GO:0006468
Psa6g0019 548 ProSiteProfiles Protein kinase domain profile. 269 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0019 548 ProSiteProfiles ACT domain profile. 137 215 IPR002912 -
Psa6g0019 548 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 17 101 - -
Psa6g0019 548 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 101 524 - -
Psa6g0019 548 CDD STKc_MAP3K-like 275 521 - -
Psa6g0019 548 Gene3D Phosphorylase Kinase; domain 1 260 346 - -
Psa6g0019 548 Coils Coil 187 207 - -
Psa6g0019 548 SUPERFAMILY ACT-like 133 205 IPR045865 -
Psa6g0019 548 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 101 524 - -
Psa6g0019 548 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 17 101 - -
Psa6g0019 548 Gene3D Transferase(Phosphotransferase) domain 1 347 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0019 Psa-Chr6 852438 859122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0019 3 524 MAP Kinase Kinase Kinase AT2G17700 51.332 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa6g0019 PK_Tyr_Ser-Thr 6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0019 - - mtr:MTR_1g026160 711.064