Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa6g0012 | ATGTTCAGCATATCTCGGATCCATGATAACTCTGTGCTTGAAAGCCTCAATCTGAAAATTCCTCTTCCTCTGGCTTTTTTTGGCGTGTTTGATGGACATGGAGGTGCCAAAGCTGCGGAGTTTGCTGCGAATAACTTGGAAAAGAACATCTTGGATGAGGTTATCATGAGTGAAGAACAAGATGTTGAGGAGGCAGTGAAGCGCGGTTACCTCAATACTGATTCTGAGTTCATGAAACAAGATCCCCATGGTGGTTCTTATTGTGTAACAGCATTGATTAGGAACGGTAACTTAGTTGTATCTAACGCTGGTGATTGCCGTGCTGTCATTAGTAGAGGAGGGGTTGCAGAGGCCCTAACATCTGATCATCGACCTTCCAGGGAAGATGAACGGGAAAGAATTGAGACCTCGGGTGGTTATGTTGATTTATGCCGTGGTGTTTGGCGGATTCAAGGATCTCTGGCTGTATCTAGAGCTATCGGAGACCGACACCTGAAACAATGGGTGACTGCAGAGCCTGAAACTAAAGTTAGTAACCAAGAAGCAGTAGACATTGCTTGTCAATTTTGCGTAGGAAACAACGAACAACGACCATTGCTGGCATGTAAAAAGCTTGCAGAATTGTCTGCTTCGCGAGGCTCGTTGGATGATACGAGTGTTATGCTAATCAAATTGAAACATTATACTTAG | 690 | 0.4435 | MFSISRIHDNSVLESLNLKIPLPLAFFGVFDGHGGAKAAEFAANNLEKNILDEVIMSEEQDVEEAVKRGYLNTDSEFMKQDPHGGSYCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERERIETSGGYVDLCRGVWRIQGSLAVSRAIGDRHLKQWVTAEPETKVSNQEAVDIACQFCVGNNEQRPLLACKKLAELSASRGSLDDTSVMLIKLKHYT* | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa6g0012 | 229 | PANTHER | PROTEIN PHOSPHATASE 2C | 15 | 177 | IPR015655 | GO:0004722|GO:0006470 | |
Psa6g0012 | 229 | PANTHER | PROTEIN PHOSPHATASE 2C | 176 | 228 | IPR015655 | GO:0004722|GO:0006470 | |
Psa6g0012 | 229 | SMART | PP2C_4 | 6 | 223 | IPR001932 | - | |
Psa6g0012 | 229 | CDD | PP2Cc | 19 | 225 | IPR001932 | - | |
Psa6g0012 | 229 | SUPERFAMILY | PP2C-like | 23 | 227 | IPR036457 | - | |
Psa6g0012 | 229 | Gene3D | - | 8 | 229 | IPR036457 | - | |
Psa6g0012 | 229 | Pfam | Protein phosphatase 2C | 24 | 177 | IPR001932 | - | |
Psa6g0012 | 229 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 225 | IPR001932 | - | |
Psa6g0012 | 229 | ProSitePatterns | PPM-type phosphatase domain signature. | 26 | 34 | IPR000222 | GO:0043169 | |
Psa6g0012 | 229 | PANTHER | PROTEIN PHOSPHATASE 2C-LIKE PROTEIN | 15 | 177 | - | - | |
Psa6g0012 | 229 | PANTHER | PROTEIN PHOSPHATASE 2C-LIKE PROTEIN | 176 | 228 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa6g0012 | Psa-Chr6 | 595462 | 596778 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa6g0012 | 25 | 227 | PP2C-type Phosphatase Gene Family | AT1G07160 | 65.198 | 3.86e-94 | 279 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa6g0012 | K17506 | - | gmx:100797934 | 348.977 |