Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0012 ATGTTCAGCATATCTCGGATCCATGATAACTCTGTGCTTGAAAGCCTCAATCTGAAAATTCCTCTTCCTCTGGCTTTTTTTGGCGTGTTTGATGGACATGGAGGTGCCAAAGCTGCGGAGTTTGCTGCGAATAACTTGGAAAAGAACATCTTGGATGAGGTTATCATGAGTGAAGAACAAGATGTTGAGGAGGCAGTGAAGCGCGGTTACCTCAATACTGATTCTGAGTTCATGAAACAAGATCCCCATGGTGGTTCTTATTGTGTAACAGCATTGATTAGGAACGGTAACTTAGTTGTATCTAACGCTGGTGATTGCCGTGCTGTCATTAGTAGAGGAGGGGTTGCAGAGGCCCTAACATCTGATCATCGACCTTCCAGGGAAGATGAACGGGAAAGAATTGAGACCTCGGGTGGTTATGTTGATTTATGCCGTGGTGTTTGGCGGATTCAAGGATCTCTGGCTGTATCTAGAGCTATCGGAGACCGACACCTGAAACAATGGGTGACTGCAGAGCCTGAAACTAAAGTTAGTAACCAAGAAGCAGTAGACATTGCTTGTCAATTTTGCGTAGGAAACAACGAACAACGACCATTGCTGGCATGTAAAAAGCTTGCAGAATTGTCTGCTTCGCGAGGCTCGTTGGATGATACGAGTGTTATGCTAATCAAATTGAAACATTATACTTAG 690 0.4435 MFSISRIHDNSVLESLNLKIPLPLAFFGVFDGHGGAKAAEFAANNLEKNILDEVIMSEEQDVEEAVKRGYLNTDSEFMKQDPHGGSYCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERERIETSGGYVDLCRGVWRIQGSLAVSRAIGDRHLKQWVTAEPETKVSNQEAVDIACQFCVGNNEQRPLLACKKLAELSASRGSLDDTSVMLIKLKHYT* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0012 229 PANTHER PROTEIN PHOSPHATASE 2C 15 177 IPR015655 GO:0004722|GO:0006470
Psa6g0012 229 PANTHER PROTEIN PHOSPHATASE 2C 176 228 IPR015655 GO:0004722|GO:0006470
Psa6g0012 229 SMART PP2C_4 6 223 IPR001932 -
Psa6g0012 229 CDD PP2Cc 19 225 IPR001932 -
Psa6g0012 229 SUPERFAMILY PP2C-like 23 227 IPR036457 -
Psa6g0012 229 Gene3D - 8 229 IPR036457 -
Psa6g0012 229 Pfam Protein phosphatase 2C 24 177 IPR001932 -
Psa6g0012 229 ProSiteProfiles PPM-type phosphatase domain profile. 1 225 IPR001932 -
Psa6g0012 229 ProSitePatterns PPM-type phosphatase domain signature. 26 34 IPR000222 GO:0043169
Psa6g0012 229 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 15 177 - -
Psa6g0012 229 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 176 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0012 Psa-Chr6 595462 596778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0012 25 227 PP2C-type Phosphatase Gene Family AT1G07160 65.198 3.86e-94 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0012 K17506 - gmx:100797934 348.977