Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0006 ATGGAGCTACAACGTGGAAATTTGAATACTATAATCGACCCAAGAAGCGGGTTTTGCAGTTCCAATTCAGTCTTCTACAGCAAAAGAAAACCTCTCTCTCTTCCTCCAAACCACTCCTTAGATGCCACCACTTTCATCTCCTCCCGCGCTCATCACGGCAACATCGCCTTCATCGACGCCTCCACCGGCCGTCAATTCACCTACCAACAACTCTGGCGAGCTGTTGATTCCGTCACCTCCTCACTCTCCACCATGGGAATTCGAAAAGGCGACGTCATCCTCCTCTTATCTCCCAACTCCATCTACTTTCCCGTCGTCTGTCTCTCCGTCATGTCCCTCGGCGCCGTCATCACTACCACCAATCCCCTCAACACAACACGCGAAATCGCAAAGCAGATCGCAGACTCCAAACCCGTCCTCGCCTTCACAACCCCTCAACTCGTTTCCAAAATCACTGGAGCATCCCCCTCACTCCCAATTATTCTCATGGACACAGACGGCAACTCATCATCAACAAACACACTGGAGAAAATGATGGAGAAAGAACCGGAGTTGAGTAGATTGAGTAGAGTGAGTGAGCGAGTCAACCAGGACGACACGGCCACTCTACTTTACTCTTCCGGAACTACTGGACCCAGCAAAGGAGTAGTATCTTCCCACAAGAACCTGATAGCGATGGTTCAAATCGTAATGTCTAGGTTCAGTAAAGAAGAAGAGGATCGTGGAGAAACATTCATATGTACGGTTCCAATGTTTCATATATACGGTCTTGCGGTGTTTGCTACGGGGCTTCTCGCATTAGGTTCAACCATCGTTGTCCTCTCCAAGTTCGAGATGCATGACCTGCTTTCATCCATTGAGAAATTCAGAGCCTCGTTCTTACCGCTGGTGCCGCCCATACTGGTTGCTATGCTGAACAACGCAGATGCGATTAAGAGCAAGTACGATTTGAGTTCCCTTCATTCGGTGGTCTCCGGTGGGGCTCCTCTGAGTAAAGAGGTTACAGAAGGGTTTATTGAAAAGTACCCTAACGTACGGATCCTTCAGGGTTATGGTCTGACAGAATCTTCTGGAATTGGGGCTTCCACGGAATCTTTGGAAGAGAGCCGTAGGTACGGCACGGCTGGGCTTATTGCTTGTTTGACGGAGGCTATGATTGTTCATACGGAAACTGGTAAGCCGCTACCGGTTAATCAGACTGGTGAGCTTTGGCTCAGGGGTCCCACCATCATGAAAGGTTATTTTAGCAACGAGGAGGCGACAACATCAACTATTAATCCAGAGGGTTGGTTAAGAACAGGGGATGTATGCTATATTGATAATGATGGATTCTTATTTGTGGTGGATCGTCTGAAAGAGCTTATCAAATACAAGGGATATCAGGTCCCTCCAGCAGAACTAGAGGCGTTGTTGCTCACTCATCCTGCTATTTTAGATGCTGCTGTTATACCGTATCCAGATAAAGAGGCTGGGCAATGTCCAATGGCATATGTGGTAAGGAAGTCGGGAAGTAACTTATCACAAACTCAAGTAATGGATTTTGTTGCGGAGCAGGTGGCTCCATACAAAAGAATTCGAAAAGTGGCATTCATATCATCTGTACCCAAAAATCCATCTGGTAAAATTCTTCGGAAGGATCTCATCGCCCTTGCTACGTCTAAAATCTGA 1668 0.4742 MELQRGNLNTIIDPRSGFCSSNSVFYSKRKPLSLPPNHSLDATTFISSRAHHGNIAFIDASTGRQFTYQQLWRAVDSVTSSLSTMGIRKGDVILLLSPNSIYFPVVCLSVMSLGAVITTTNPLNTTREIAKQIADSKPVLAFTTPQLVSKITGASPSLPIILMDTDGNSSSTNTLEKMMEKEPELSRLSRVSERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEEEDRGETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRASFLPLVPPILVAMLNNADAIKSKYDLSSLHSVVSGGAPLSKEVTEGFIEKYPNVRILQGYGLTESSGIGASTESLEESRRYGTAGLIACLTEAMIVHTETGKPLPVNQTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQCPMAYVVRKSGSNLSQTQVMDFVAEQVAPYKRIRKVAFISSVPKNPSGKILRKDLIALATSKI* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0006 555 Gene3D - 22 452 IPR042099 -
Psa6g0006 555 Gene3D - 453 554 IPR045851 -
Psa6g0006 555 SUPERFAMILY Acetyl-CoA synthetase-like 43 553 - -
Psa6g0006 555 PANTHER BNAA06G14440D PROTEIN 11 554 - -
Psa6g0006 555 Pfam AMP-binding enzyme 49 457 IPR000873 -
Psa6g0006 555 CDD 4CL 34 547 - -
Psa6g0006 555 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Psa6g0006 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 554 - -
Psa6g0006 555 Pfam AMP-binding enzyme C-terminal domain 466 541 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0006 Psa-Chr6 361470 363991 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0006 11 555 Monolignol Biosynthesis Gene Families AT1G20500 65.761 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0006 K10526 - gmx:100811344 861.292