Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7098 ATGGCAGATCTCAAAGAGAGGTTACTGCCACCAAAACCTGCATCAGCTTTTAACTTGAGAGAGGCTGCCGGTCGACCAACTGCCTCTGGAAGACATCCTTTTCAAGGAGTGGATGTTTTGGAGGTGAAGAAGCGAGGCCAAGGTCTTAAATCATGGATTCGTGTTGATACGTCTGGAAACTCTCAGGTTATGGAGGTAGACAAGTTTACTATGATGCGGCGATGTGATCTTCCTGCCCGTGATCTTCGTCTTCTCGATCCTGTGTTTGTTTATCCGTCAACAATCCTTGGTAGGGAGAAGGCCATTGTTGTAAATCTAGAGCAGATACGATGTATTATTACAGCAGATGAGGTTCTTCTCTTGAATTCCCTTGATAAATATGTATTGCAATATGTGATTGATCTCCAACGAAAGTTGACAACAACTGGGGCAGGCGAGGTTGGCGACGTAGGCGAGGTCTGGCAATCAGACAATTCTGACATGAACCAAAGGAGAGGCAATAGGAATTTTGAAAATTTATATAGCAACACTTCCCCTGATTATTTACCTTTTGAATTCAGGGCTCTTGAAGTTGCCCTCGAGGCAGCATGCACATTTCTTGACACCCAGGCGGCAGAGTTAGAAATCGAGGCTTATCCGTTGCTGGATGAACTGACATCAAAGATCAGTACTCTTAATTTGGAACGTGTTCGTCGGTTGAAAAGCAGACTTGTTGCCTTGACTAGGAGAGTTCAGAAGGTTAGAGACGAAATAGAGCAGCTCATGGATGATGATGGTGATATGGCTGAAATGTACCTTACCGAGAAGAAAAGCCGGATGGAAATGTCTTTTTATGGAGATCAGTCTATGATTGGATATAGATCAGCTGATGGTGCATCCATCTCTGCTCCAGTCTCTCCTGTTTCATCACCACCCGACTCTCGGAGGCTTGATAAGAGCTTGAGCATGGCTAGGAGTCGACATGAAAGCATGAGGAGTACCGAAAGTAATACGGAAAATATAGAAGAGCTTGAAATGTTGTTAGAAGCATACTTTGTTGTCATTGACAGCTCACTAAACAAGTTGACATCGCTAAAAGAATACATCGATGACACGGAAGATTTCATCAACATTCAACTGGATAATGTGCGGAATCAGCTTATCCAATTTGAGCTTTTGCTCACAACTGCAACATTTGTGGTTGCAATCTTTGGAGTGGTGGCAGGAGTATTTGGGATGAACTTTGAAATTCCATTATTTGATGTCCCATCTGCATTCCAATGGGTCCTCATAATAACCGGAGTCGTTGGAGTTTGTATATTTTCTGCATTCGTATGGTTCTTCAAATACAGAAGACTCATGCCGCTTTAG 1350 0.4326 MADLKERLLPPKPASAFNLREAAGRPTASGRHPFQGVDVLEVKKRGQGLKSWIRVDTSGNSQVMEVDKFTMMRRCDLPARDLRLLDPVFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDKYVLQYVIDLQRKLTTTGAGEVGDVGEVWQSDNSDMNQRRGNRNFENLYSNTSPDYLPFEFRALEVALEAACTFLDTQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMEMSFYGDQSMIGYRSADGASISAPVSPVSSPPDSRRLDKSLSMARSRHESMRSTESNTENIEELEMLLEAYFVVIDSSLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPLFDVPSAFQWVLIITGVVGVCIFSAFVWFFKYRRLMPL* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7098 449 Gene3D Magnesium transport protein CorA, transmembrane region 124 380 - -
Psa5g7098 449 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 386 439 IPR045863 -
Psa5g7098 449 CDD Mrs2_Mfm1p-like 52 446 IPR039204 -
Psa5g7098 449 Gene3D - 37 123 - -
Psa5g7098 449 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 449 - -
Psa5g7098 449 MobiDBLite consensus disorder prediction 296 329 - -
Psa5g7098 449 Gene3D Magnesium transport protein CorA, transmembrane region 387 447 - -
Psa5g7098 449 MobiDBLite consensus disorder prediction 311 329 - -
Psa5g7098 449 Pfam CorA-like Mg2+ transporter protein 325 441 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Psa5g7098 449 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 449 IPR039204 -
Psa5g7098 449 Coils Coil 230 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g7098 Psa-Chr5 579241327 579245283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7098 1 449 MRS2 Gene Family AT1G16010 83.111 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7098 K16075 - gmx:100779803 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g7098 5 579241327 579245283 Psa5g7098 5 579241327 579245283 ECH