Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7097 ATGTTGATCAAGGTGAAGAACTCCACAATGGTGCCTCCGTCGGAGGAGACACCTCCAACTGCGATATGGAATTCCAACGTCGACTTGGTGGTTCCGAATTTTCACACACCGAGCGTCTACTTTTACAGACCAAACGGCGCGTCCAATTTCTTCGACGCTAAGATCATGAAGGAAGCTCTGAGCAAGGTGCTGGTTCCGTTCTATCCGATGGCAGCTCGTCTCCGCCGTGACGAGGACGGTCGTGTTGAGCTTTATTGCGACGGTCAGGGAGTGCTTTTTGTAGAGGCTGATGCAACCGCCTCCGTTGATGATTTCGGAGACTTCGCTCCCACGCTTCGACTCCGTGAGTTAATCCCAGCCGTTGATTATTCTGCCGGTATTGAAACGTATCCACTGTTGGTGTTGCAGGTAACGTATTTCAAATGTGGAGGAGTTTCTTTAGGAGTTGGTATGCAACATCATGTAGCTGATGGAGCATCTGGTCTTCATTTCATCAACTCATGGTCTGACATGGCTCGTGGCATTGATGTTTCCATTTCACCATTCATTGATAGAACATTACTTCATGCTCGGGATCCACCTCGACCTGTTTTTGATCACATTGAATACAAACCTCCACCATCAATGAAAACTGATCATCCCTTACTGCAACCTGCAAAACCAGACTCGGACGCAGCTGCTGCAGTGTCCATCTTCAAATTGACCCGTGACCAACTCAACATCTTGAAGGGTAAGTCCAAAGAAGATGGAAACACTATCAACTATAGCTCTTATGAGATGCTGGCAGGTCATGTATGGAGAAGTGTAAGTAAAGCAAGAGCACTTCCTAATGATCAAGAAACAAAACTGTACATTGCAACAGATGGAAGATCAAGGCTTCAACCTCCACTTCCGCAAGGCTACTTTGGCAATGTGATATTCACAACAACTCCAATAGCAGTTGCAGGGGATTTAATGTCAAAACCAACATGGTATGCTGCTAGCAGAATCCATGATGCATTGTTACGAATGGATAATGAATATTTGAGATCTGCTTTGGACTATCTTGAGCTACAACCTGATTTAAGAGCTCTTGTTCGTGGAGCACATACTTTTAAGTGTCCAAATCTTGGTATCACTAGCTGGGCAAGGTTGCCAATCCATGATGCCGACTTTGGTTGGGGAAGACCTATATTCATGGGACCTGGTGGCATTGCATATGAAGGACTATCTTTCATCATTCCAAGCTCAACAAATGATGGTAGTTTGTCTGTGGCAATTGCTCTGCCTCCTGACCAGATGAAACTGTTTCAGGAATTTTTCTATGATATTTGA 1314 0.4513 MLIKVKNSTMVPPSEETPPTAIWNSNVDLVVPNFHTPSVYFYRPNGASNFFDAKIMKEALSKVLVPFYPMAARLRRDEDGRVELYCDGQGVLFVEADATASVDDFGDFAPTLRLRELIPAVDYSAGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINSWSDMARGIDVSISPFIDRTLLHARDPPRPVFDHIEYKPPPSMKTDHPLLQPAKPDSDAAAAVSIFKLTRDQLNILKGKSKEDGNTINYSSYEMLAGHVWRSVSKARALPNDQETKLYIATDGRSRLQPPLPQGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHDALLRMDNEYLRSALDYLELQPDLRALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALPPDQMKLFQEFFYDI* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7097 437 Pfam Transferase family 3 435 - -
Psa5g7097 437 Gene3D - 1 205 IPR023213 -
Psa5g7097 437 Gene3D - 219 437 IPR023213 -
Psa5g7097 437 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 436 - -
Psa5g7097 437 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g7097 Psa-Chr5 579120877 579124912 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7097 1 437 Monolignol Biosynthesis Gene Families AT5G48930 75.515 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7097 K13065 - gmx:100801923 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g7097 5 579120877 579124912 Psa5g7097 5 579120877 579124912 ECH