Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7080 ATGGGTAAAGTCATACAACACCAAGAAATGGTGTTGCTGCTGGAAATGGTGAAGGTGGTGTTGTTCCTGAAGGAGAAGATTGTGTGGGGTATTGTTTTGGCTTCTCATGTGGTTCAAAAGGTGGGGGAAACCAGCAGGGAGGTTCTCCTCATCCTCCTCCCACCCCCTGTTGGAAATGTTGAAGCTCCAATAAATGGAAACGGTGAAGGTGTTGCAGCTGGAAATGGTGAACGAAATGGTGAAGATGTTCCTGTTGGAAATGGTGAAGGTGTTTCTGCTGAAAATGATCATGACAGAAAGTTTGAAGTGCGTGCTACATTGGGTCGTCCATTCAGAAACTATTGGACTATGGCTATATTGCAGTGTTACATAGATTCCATGGTGGATCCTAGAGGATGGGAAGAGATATTGGGGCAGGACATAGATAAGTTTACTTCTGTGGAGTTTAGAAATATTGGATCTGGGTCAAACACGGATGGTAGAGTGGATTGGCCTGGTGTTGGAGTTCTTGGAAACCATAATCAAGCACTTGTTTGCACTGCTTCCTATTTCTTAGATGCTGACTCTTGGATTCCCACTAGAGGAGATGGGAAAAGTCATACTTCTTCAAGAAATGGTGTTGCTGCTGGAAATGGTGAAGGTGGTGTTGTTCCTGAAGGAGAAGATTGTGTGGGGTGTTGTTTTGGCTTCTCATGTGGGTCAAAAGAAGATGAGGACAAAAAGTTTGAAGTGTGTGCTACATTGGGTCGTCCATTGAGAAACTATTGGACTGTGCCTATATTGGAGTGTTACATAGATTCCATGGTGGATTCTAGAGGTTGGGAAGAGATGTTGGGGTAG 840 0.4429 MGKVIQHQEMVLLLEMVKVVLFLKEKIVWGIVLASHVVQKVGETSREVLLILLPPPVGNVEAPINGNGEGVAAGNGERNGEDVPVGNGEGVSAENDHDRKFEVRATLGRPFRNYWTMAILQCYIDSMVDPRGWEEILGQDIDKFTSVEFRNIGSGSNTDGRVDWPGVGVLGNHNQALVCTASYFLDADSWIPTRGDGKSHTSSRNGVAAGNGEGGVVPEGEDCVGCCFGFSCGSKEDEDKKFEVCATLGRPLRNYWTVPILECYIDSMVDSRGWEEMLG* 280
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7080 279 Gene3D - 62 200 IPR012334 -
Psa5g7080 279 PANTHER PECTINESTERASE 234 277 - -
Psa5g7080 279 PANTHER PECTINESTERASE 98 195 - -
Psa5g7080 279 Pfam Pectinesterase 92 187 IPR000070 GO:0030599|GO:0042545
Psa5g7080 279 PANTHER PECTINESTERASE 98 195 - -
Psa5g7080 279 PANTHER PECTINESTERASE 234 277 - -
Psa5g7080 279 SUPERFAMILY Pectin lyase-like 98 199 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa5g7080 Psa-Chr5 577994353 577997894 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7080 60 195 Carbohydrate Esterase AT3G60730 35.172 5.93e-17 78.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7080 K01051 - gmx:102665195 115.931