Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7079 ATGTCACGGGAAAATGAGGACAAAAAGTTTGAAGTACGTGCTACATTGGGTCGTCCATTGAGAAACTATTGGACTATGGCTATATTGCACTGTGTCATAGATTCCATGGTGGATCCTAGAGGTTGGGAAGAGATGTTTGGGCAGGGCATAGATAAGTTTACTTATGTGGAGTTTGGAAATATTGGACCTGGGTCAAACACGGATGGAGATGGGGAAAGTCGTACAACTCCAAGAAATGGTGTTGTTGCTGGAAATGGTGAAGGTAGTGTTGTTCCTGAAGGAGAAGATTATCTTGGGTGTTGTTTTGGCTTCTCATGTGGGTCAAAAGGTGGGGGAAACCAGCAGGGAGGTTCTCCTCCTCCTCCTCCTCCTCTAGCCCTTGCTGGAAATGTTGAAGCTCCAATAAATGGAAGTGGTGAAGGTTTTGCTGCTGAAAATGGTGAAGGAAGTGGAGAAGGTGTTGCTGCTGGAAATGGTGAAGGTGTTGCTACTGGAAATGGTGAAGGAAATGATGAAGGTGTTATTGCTGGAAATGGTGAATGTGTTGTTGATCATGAAGAAGAAGACTGTGTGGGGTGTTTTTTTGGCTTCTCATGTGGGCCAAAAGATGGTAGAGTGGATTGGCCTGGTGTGAGAGTTCTTGGAAACCATAATCAAGCACTTGTTTTCAGTGCTTCCTATTTCTTAGCTGCGGACTGTTGGATTCCCACTAGAGGAGTTCCTTATGACGGAGATGGGAAAAGTTGTACAACACCAAGAAATGGTGTTGCTGCTGGAAATGATGAAGGTGGTGTTGTTCCTGAAGGAGAAGATTGTGTGGGGTGTTGTTTTCGCTTCTCATGTGGGCAAAAAGGTGGGGGAAACCAGCAGGGAGTTTCTCCTCCTCCTCCTCCACCCCCTGCTGGAAATGTTGAAGCTCCAATAAATGGAAATGGTGAAGGTGTTGCTGTTGAAAATGGTGAAGGTGTTGCTACTGGAAATGGTGAAGGAAATGATGAAGGTCTTGTTGCTAGAATTGGTGAATGTGTTGCTGATCCTGAAGAAGAAGATTGTGTGGGGTGTTGTTTTGGCTTCTCATGTGGGCCAAAAGCTCCAAGAAATGTTGTTGCTGCTCGAAATGATGAAGGCGGTGTTGTTCCTGAAGGAGAAGATCGTGTGGGGTATTGTTTTGGCTTCTCAAGTGGGTCAAAAGGTGGGGGAAACCAGCAGGGAGGTTCTCATTCTCCTCCTCCTCCACCACCCTTGCTTGAAATGGAAAGTCGTACAACTCCAAGAAATGGTGTTGCTGCTGGAAATGGTGAAGATGGGGGAAACCAGCAGGGAGGTTCTCCTCCTCCTCCTCCACCCCCTACTGGAAATGTTGAAGCTCCAATAAATGGAAATGGTGAAGGTGTTGCTGCTGGAAATGGTAAAGGAAATGGAGAAGGTGTTTTTGTTGGAAATGGTGAAAGAAATGGTGAAGGTGTTGCTACTGAAAATGGTGAAAGAAATTATGAAGGTTGTGCTGCTGGAAATGGTGAAGGTGTTGCTACTGGAAATGGTGAAGGAAATGATGAAGGTATTGTTGCTAGAAATGGTAAATGTGTTGCTGATCCTGAAGAAGAAAACTGTGTAGGGTGTTGA 1623 0.4541 MSRENEDKKFEVRATLGRPLRNYWTMAILHCVIDSMVDPRGWEEMFGQGIDKFTYVEFGNIGPGSNTDGDGESRTTPRNGVVAGNGEGSVVPEGEDYLGCCFGFSCGSKGGGNQQGGSPPPPPPLALAGNVEAPINGSGEGFAAENGEGSGEGVAAGNGEGVATGNGEGNDEGVIAGNGECVVDHEEEDCVGCFFGFSCGPKDGRVDWPGVRVLGNHNQALVFSASYFLAADCWIPTRGVPYDGDGKSCTTPRNGVAAGNDEGGVVPEGEDCVGCCFRFSCGQKGGGNQQGVSPPPPPPPAGNVEAPINGNGEGVAVENGEGVATGNGEGNDEGLVARIGECVADPEEEDCVGCCFGFSCGPKAPRNVVAARNDEGGVVPEGEDRVGYCFGFSSGSKGGGNQQGGSHSPPPPPPLLEMESRTTPRNGVAAGNGEDGGNQQGGSPPPPPPPTGNVEAPINGNGEGVAAGNGKGNGEGVFVGNGERNGEGVATENGERNYEGCAAGNGEGVATGNGEGNDEGIVARNGKCVADPEEENCVGC* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7079 540 MobiDBLite consensus disorder prediction 66 82 - -
Psa5g7079 540 Pfam Pectinesterase 6 68 IPR000070 GO:0030599|GO:0042545
Psa5g7079 540 PANTHER PECTINESTERASE 202 244 - -
Psa5g7079 540 PANTHER PECTINESTERASE 1 70 - -
Psa5g7079 540 Gene3D - 2 81 IPR012334 -
Psa5g7079 540 MobiDBLite consensus disorder prediction 64 87 - -
Psa5g7079 540 SUPERFAMILY Pectin lyase-like 12 72 IPR011050 -
Psa5g7079 540 PANTHER PECTINESTERASE 1 70 - -
Psa5g7079 540 PANTHER PECTINESTERASE 202 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g7079 Psa-Chr5 577981128 577989510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7079 13 69 Carbohydrate Esterase AT2G45220 41.379 1.04e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7079 K01051 - gmx:102665195 85.1149