Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g7074 | ATGGTGGATCCTAGACGTTGGGAAGAGATGTCGGGGAAAGGCATAAATAAGGTTACTTATGTGAAGTTTGAAAATGTTGGACCTGGGTCAAACATGGATGGGAGAGTGGATTGGCCTGGTGTTAGAGTTCTTGGCAACCATAATCAAGCACTTGTTTTCACTGCTTCCTATTTCTTAGATGTTGACTCTTGGATTCCCATTAGAGGTGTTCCTTATGATAGTGAACTATAA | 231 | 0.4156 | MVDPRRWEEMSGKGINKVTYVKFENVGPGSNMDGRVDWPGVRVLGNHNQALVFTASYFLDVDSWIPIRGVPYDSEL* | 77 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g7074 | 76 | PANTHER | PECTINESTERASE | 1 | 74 | - | - | |
Psa5g7074 | 76 | SUPERFAMILY | Pectin lyase-like | 11 | 73 | IPR011050 | - | |
Psa5g7074 | 76 | Pfam | Pectinesterase | 2 | 60 | IPR000070 | GO:0030599|GO:0042545 | |
Psa5g7074 | 76 | Gene3D | - | 1 | 76 | IPR012334 | - | |
Psa5g7074 | 76 | PANTHER | PECTINESTERASE | 1 | 74 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g7074 | Psa-Chr5 | 577906219 | 577906449 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g7074 | 1 | 76 | Carbohydrate Esterase | AT2G45220 | 45.455 | 2.94e-17 | 72.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g7074 | K01051 | - | gmx:102665195 | 94.7449 |