Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7070 ATGCATATGGAGATTGCAGCTGCATTCTTAATGGTGCTCTTGATCTCATTCAATGCAGTTGCAGGTAGTAGTGGTAGTATTAATAGTATAGTATCCAAAGATAGGAATAGTGGAAATTATACAACAGTGGGTGAAGCTATCAGGAATGCCCCGGAGTTTAGTCAAAAACCTTATATAATTCACGTTTTAGCAGGCATTTATCAAGAGTACATTCTCATTCCATCCACTAAGATTAATATTCACCTTTTTGGAGATGGTCCTAATCACACAATCATTCTTGCCAACCAAAATGGTTCAACAATAGACATCCGAGGAGAAGGATTCATGGCACAAAACATTGGAGTTATTAACTCAGCAGGACTAGATGCAAGCGCTGCAGTGGCTGTTCGAAACGAGGCAAACAATAGCATTTTCTTTCAATGCTCCATCCAAGGTTTCCAAGACACATTATGGGCTGTTTCCGGTAGACAATTCTACAAAAACTGTGACATTTACGGTACCGTCGACTTCATCTACGGTAACGCCGCTGCTGTATTTCAAGACTGCATGATTTACGCACGTTATCGACAGTTCGTGACATTCACCGCACAGTCACGTGAGAGTCCATATGAGAAGACAGGTTTCACATTCCAACGATGTAGTTTTACTATGTCACCGGAAGATGAGGATAGAAAGTCAGAGGTACGTGCTACTTTGGGTCGTCCATTGAGAAACTATTCAACTGTGGCTATTTTGCAGTGTTACATAGATTCCATGGTGGATCCTAAAGGTTGGGAAGAGATGTCGGGGCAGGGCATTGATAAGGTTACCTATGTGGAGTTTGAGAATGTTGGACCTGGGTCAAACACGGATGGTAGAGTGGATTGGTCTGGTGTTAGAGTTCTTGGCAACCATAATCAAGCCCTTGTTTTCACTGCTTCCTATTTCATAGATGCTGACTCTTGGATTCCCACCAGAGGTGTTCCTTATGACAGTGAACTATAA 984 0.4217 MHMEIAAAFLMVLLISFNAVAGSSGSINSIVSKDRNSGNYTTVGEAIRNAPEFSQKPYIIHVLAGIYQEYILIPSTKINIHLFGDGPNHTIILANQNGSTIDIRGEGFMAQNIGVINSAGLDASAAVAVRNEANNSIFFQCSIQGFQDTLWAVSGRQFYKNCDIYGTVDFIYGNAAAVFQDCMIYARYRQFVTFTAQSRESPYEKTGFTFQRCSFTMSPEDEDRKSEVRATLGRPLRNYSTVAILQCYIDSMVDPKGWEEMSGQGIDKVTYVEFENVGPGSNTDGRVDWSGVRVLGNHNQALVFTASYFIDADSWIPTRGVPYDSEL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7070 327 PANTHER PECTINESTERASE 10 325 - -
Psa5g7070 327 Pfam Pectinesterase 30 313 IPR000070 GO:0030599|GO:0042545
Psa5g7070 327 PANTHER PECTINESTERASE 10 325 - -
Psa5g7070 327 Gene3D - 26 327 IPR012334 -
Psa5g7070 327 SUPERFAMILY Pectin lyase-like 28 324 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g7070 Psa-Chr5 577882253 577883768 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7070 17 327 Carbohydrate Esterase AT3G05610 39.198 5.01e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7070 K01051 - gmx:102665195 431.024