Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7069 ATGGCGGAGCATAAGATGGAGACTGATTTCGATGAGGAAACTCCTCTCAGTTCTTCTTCTACTACTGCATCTAAACCTCATACTTTTCATTTCGATTCATCACTTCCTTTACCCAAATCATCATCTTCTTCTTCGACTAGACGAATCAGTAGGAGTATTTATACTGTTTTAATCAAAGCTAAGATCAACATCTTGTTACCTTTTGGCCCCTTGGCTATCTTCCTGCATTATTTCACTGCTAAACATGTTTGGGTTTTCTTCTTCGCTTTATTGGGGATTGCTCCATTGGCTGAACGTCTAGGTTATGCTACCGAACAACTTGCCTTCTACACCGGATCAACAGTTGGGGGTTTGCTCAATGCTACATTTGGAAATGCAACTGAAATGATTATATCAATTTACGCCTTGAAAAGCGATATGATTAGGGTTGTTCAGCAATCTTTACTTGGTTCCATCTTGTCTAATATGCTTCTAGTTCTTGGATGTGCATTCTTTACCGGTGGGATTGTTCACTACCAAAAACTTCAGGTTTTCAATAAGGCAGCTGCTGTTGTCAATTCCGGCTTACTGCTCATGGCTGTAATGGGAATACTGTTTCCTGCTGTGCTTCATTTTACTCACTCAGAAGTTCATCTTGGGAAGTCAGTCTTATCCTTATCCAGATTTAGCAGTTGCATAATGCTACTGGCGTATGCAAGCTACCTTTTCTTTCAACTTAGAAGTCAACACAATTTTTATACTCCAGTTGACCAGGAAGTAGATACAAGCGAAAACACTGACGAGGAGGAAGAACTTGAGTTAACTAAGTGGGAAGCGATAATCTGGCTCGCTATTTTGACAGTATGGGTATCGGTATTGTCTGGATACCTTGTGGATGCCATAGAGGGAGCATCTGAATCGTTGAATATGTCAGTGGCTTTTATTAGCGTCATCTTGCTTCCAATAGTAGGAAATGCTGCAGAGCATGCAAGTGCTATCATGTTTGCCGTAAAGGACAAGCTAGATATCACAATTGGAGTTGCTGTTGGATCATCAACCCAGATATCAATGTTTGTGATCCCTTTCTGTGTGGTTGTTGGGTGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCAACACTTTTTATCACAGTGCTGGTAGTTGCATTTATGATGCAGGAAGGGACCTCGAACTATTTTAAAGGCTTGATGCTTATTCTATGCTATCTTATAGTTGCTGCCAGTTTTTTTGTACATGTTGACCCTAAAAGTGATGATGACTAA 1278 0.4038 MAEHKMETDFDEETPLSSSSTTASKPHTFHFDSSLPLPKSSSSSSTRRISRSIYTVLIKAKINILLPFGPLAIFLHYFTAKHVWVFFFALLGIAPLAERLGYATEQLAFYTGSTVGGLLNATFGNATEMIISIYALKSDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYQKLQVFNKAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCIMLLAYASYLFFQLRSQHNFYTPVDQEVDTSENTDEEEELELTKWEAIIWLAILTVWVSVLSGYLVDAIEGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSDDD* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7069 425 MobiDBLite consensus disorder prediction 1 24 - -
Psa5g7069 425 TIGRFAM cax: calcium/proton exchanger 65 415 IPR004798 GO:0006816|GO:0015369
Psa5g7069 425 Pfam Sodium/calcium exchanger protein 273 412 IPR004837 GO:0016021|GO:0055085
Psa5g7069 425 Pfam Sodium/calcium exchanger protein 82 239 IPR004837 GO:0016021|GO:0055085
Psa5g7069 425 TIGRFAM caca2: calcium/proton exchanger 54 415 - -
Psa5g7069 425 Gene3D - 112 256 IPR044880 -
Psa5g7069 425 Gene3D - 258 416 IPR044880 -
Psa5g7069 425 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 3 423 IPR004713 GO:0006812|GO:0008324|GO:0016021
Psa5g7069 425 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g7069 Psa-Chr5 577861637 577865982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7069 3 424 Antiporters AT1G55730 68.322 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7069 K07300 - gmx:100806000 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g7069 5 577861637 577865982 Psa5g7069 5 577861637 577865982 ECH