Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7068 ATGAGCGATAGCATGAAAAACATGGCCACGGGTTCCACTTCCCGCGGTTCAAACGCATCCTCCAATGGACTCCTCACCGTCACCATTGCCAACACCAGCCCTCGCCGCACCCTCGCTTCCGATGACAATGACGACGAACACGACCTCCTCAGTGATCCCGATGATCCTTTCGACATTACTCATACCAAAAATGCTCCTCCCGAAACCCTCAAACGTTGGCGACAAGCTGCATTTGTGCTCAATGCCTCAAGGCGTTTTCGATATACTCTTGACTTGAAAAAGGAAGAGGAGAAGGAGCAAAAGAAAAGCATGATTCGAGCTCATGCCCAAGTCATCAGAGCAGCTTTGCTTTTCAGATTGGCCGGTGAACGTCAACTAGTGACAGCTACAACAGTGGCATCCACAAATCCAGGTGGTGACTATACAGTTGGACTTGAACAACTTGTTTCAATGTCCAAGAATCAAAATATTTCGGCTTTAGAACAATATGGAGGGGTTAAAGGCTTATCAGAGTTTCTAAAATCAGATATAGATAAAGGGATTAGTGGAGATGACGATGATCTATCAAAAAGGAAAAGTGCATTTGGAACTAATACATACCCTCGGAAAAAGGGTAAAGGTTTATGGAGGTTCCTATGGGAAGCTTGGCAAGATCTGACCCTTATAATATTGATTATAGCAGCTGCAGTGTCATTAGTGCTTGGAATAAAAACAGAGGGATTGGAAGAAGGATGGTATGATGGAGGAAGCATTGCTTTTGCAGTTATACTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGACAATCTTTGCAGTTTCAGAACTTGAATGCAGAAAAACAAAATATACAATTGGAGGCCATGAGAGGTGGTAGAATAATAAAAATATCGATATTTGAAATTGTTGTTGGTGATGTACTGCCCCTTAAAATAGGAGATCAGGTTCCTGCTGACGGAGTTTTAATTATTGGTCACTCACTTGCCATTGATGAATCCAGTATGACTGGGGAAAGCAAGATTGTTCACAAGGATCAAAAAGCACCATTTTTAATGTCAGGTTGCAAAGTAGCAGATGGAGTTGGTTCTATGCTGGTAACTAGTGTTGGTATAAATACTGAGTGGGGATTGTTGATGGCAACTATCTCAGAAGATACCGGAGAAGAAACTCCCTTACAGGTACGGTTGAATGGAGTAGCAACTTTTATTGGTATTGTTGGGCTTACTGTAGCTGCAGCTGTTCTTGCAGTCCTCGTGGGAAGATACTTTTCTGGCCACACGAAAGATTTAGATGGAAAAGTGCAATTTGTTGCTGGAGTGACTAAAATCAGTGACGCTGTTGACGCATGCATCAAAATTTTTACCATTGCAGTCACAATTGTGGTTGTTGCAGTGCCAGAAGGTCTACCTTTAGCAGTTACCTTAACCCTGGCATACTCGATGCGGAAGATGATGGCAGACAAAGCCTTGGTGCGAAGGCTGTCAGCTTGTGAAACTATGGGTTCTGCTACGACAATTTGCAGTGATAAAACTGGAACCTTGACCTTAAACCAGATGACTGTAGTTGAGACATATGTTGGGAGGAAGAAATTAGATCCACCAGATGACTCATCAAAATTGCATCCAGAAGTTTTATCTCTGATAAATGAAGGCATAGCGCAAAACACAACTGGCAATATTTTCGTTCCTAAGGATGGTGGAGAGACAGAGGTTTCAGGATCTCCCACAGAGAAGGCAATTCTATCTTGGGCTATGAAGTTGGGAATGAATTTTGAACTTATAAGGTCAAGTTCAAAGGTTCTCCATGTCTTCCCTTTTAATTCTGAGAAAAAGCGAGGTGGTGTTGCTGTGAAACGGGCGGACTCTGGAGTGCATATACATTGGAAAGGAGCTGCTGAGATAGTTCTAGGAACGTGTACCCAATATATTGATTCAAATGGTCACCCACAATCTATTGAAGAAGAGAAGGCATTCTTCAAGAAGGCAATTGATGACATGGCTACTCAGAGCTTGCGCTGCGTTGCTATTGCATACAGATCATACGAATTTGACAAAATTCCGTCCAAGGAGGAGGATTTAGACCAATGGACCTTACCCGAACACGAGCTTGTATTACTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGTGTCAAAGATGCTGTAAGATTATGCACTGAGGCTGGTGTTAAGGTACGCATGGTTACTGGGGACAATCTTCAAACAGCAAAAGCAATAGCTTTGGAGTGCGGAATACTGGTTTCACTTGAAGATGCAGTTGAGCCAAATATAATTGAAGGAAAAACATTCCGTCAACTATCTGAAATGGAAAGGGAACAAGTAGCTAAGAAAATAACTGTGATGGGAAGATCATCTCCAAATGACAAGCTTTTGCTCGTGCAAGCACTGCGCAAAGAAGGTGAAGTTGTTGCTGTCACAGGAGATGGCACTAATGATGCTCCTGCTCTTCATGAGATTATGCAAAGTGTAAAGGTGTGGCTAATGTTGCACATGTGA 2517 0.4263 MSDSMKNMATGSTSRGSNASSNGLLTVTIANTSPRRTLASDDNDDEHDLLSDPDDPFDITHTKNAPPETLKRWRQAAFVLNASRRFRYTLDLKKEEEKEQKKSMIRAHAQVIRAALLFRLAGERQLVTATTVASTNPGGDYTVGLEQLVSMSKNQNISALEQYGGVKGLSEFLKSDIDKGISGDDDDLSKRKSAFGTNTYPRKKGKGLWRFLWEAWQDLTLIILIIAAAVSLVLGIKTEGLEEGWYDGGSIAFAVILVIVVTAVSDYRQSLQFQNLNAEKQNIQLEAMRGGRIIKISIFEIVVGDVLPLKIGDQVPADGVLIIGHSLAIDESSMTGESKIVHKDQKAPFLMSGCKVADGVGSMLVTSVGINTEWGLLMATISEDTGEETPLQVRLNGVATFIGIVGLTVAAAVLAVLVGRYFSGHTKDLDGKVQFVAGVTKISDAVDACIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETYVGRKKLDPPDDSSKLHPEVLSLINEGIAQNTTGNIFVPKDGGETEVSGSPTEKAILSWAMKLGMNFELIRSSSKVLHVFPFNSEKKRGGVAVKRADSGVHIHWKGAAEIVLGTCTQYIDSNGHPQSIEEEKAFFKKAIDDMATQSLRCVAIAYRSYEFDKIPSKEEDLDQWTLPEHELVLLAIVGIKDPCRPGVKDAVRLCTEAGVKVRMVTGDNLQTAKAIALECGILVSLEDAVEPNIIEGKTFRQLSEMEREQVAKKITVMGRSSPNDKLLLVQALRKEGEVVAVTGDGTNDAPALHEIMQSVKVWLMLHM* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7068 838 SFLD Haloacid Dehalogenase 488 824 - -
Psa5g7068 838 Pfam E1-E2 ATPase 286 484 - -
Psa5g7068 838 Gene3D - 67 119 - -
Psa5g7068 838 PANTHER CATION TRANSPORTING ATPASE 61 827 - -
Psa5g7068 838 MobiDBLite consensus disorder prediction 1 37 - -
Psa5g7068 838 MobiDBLite consensus disorder prediction 53 68 - -
Psa5g7068 838 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 512 718 IPR023299 GO:0000166
Psa5g7068 838 Gene3D - 516 713 IPR023299 GO:0000166
Psa5g7068 838 Gene3D - 185 382 - -
Psa5g7068 838 SMART Cation_ATPase_N_a_2 162 236 IPR004014 -
Psa5g7068 838 Pfam Cation transporter/ATPase, N-terminus 163 231 IPR004014 -
Psa5g7068 838 SFLD p-type atpase 488 824 IPR044492 -
Psa5g7068 838 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 443 531 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g7068 838 Pfam Ca2+-ATPase N terminal autoinhibitory domain 54 97 IPR024750 GO:0005516
Psa5g7068 838 PRINTS Sodium/potassium-transporting ATPase signature 249 269 - -
Psa5g7068 838 PRINTS Sodium/potassium-transporting ATPase signature 499 520 - -
Psa5g7068 838 PRINTS Sodium/potassium-transporting ATPase signature 625 643 - -
Psa5g7068 838 ProSitePatterns E1-E2 ATPases phosphorylation site. 508 514 IPR018303 -
Psa5g7068 838 Gene3D - 503 824 IPR023214 -
Psa5g7068 838 MobiDBLite consensus disorder prediction 1 68 - -
Psa5g7068 838 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 152 825 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Psa5g7068 838 SUPERFAMILY HAD-like 699 824 IPR036412 -
Psa5g7068 838 Pfam haloacid dehalogenase-like hydrolase 503 825 - -
Psa5g7068 838 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 61 827 - -
Psa5g7068 838 PRINTS P-type cation-transporting ATPase superfamily signature 330 344 - -
Psa5g7068 838 PRINTS P-type cation-transporting ATPase superfamily signature 506 520 - -
Psa5g7068 838 PRINTS P-type cation-transporting ATPase superfamily signature 706 717 - -
Psa5g7068 838 PRINTS P-type cation-transporting ATPase superfamily signature 728 738 - -
Psa5g7068 838 PRINTS P-type cation-transporting ATPase superfamily signature 813 832 - -
Psa5g7068 838 SUPERFAMILY Calcium ATPase, transduction domain A 286 379 IPR008250 -
Psa5g7068 838 Gene3D - 214 502 - -
Psa5g7068 838 SUPERFAMILY Calcium ATPase, transmembrane domain M 163 500 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g7068 Psa-Chr5 577844719 577853667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7068 17 825 Primary Pumps ATPases AT3G21180 74.939 0.0 1217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7068 K01537 - gmx:100802659 1323.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g7068 5 577844719 577853667 Psa5g7068 5 577844719 577853667 ECH