Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7066 ATGGGCGCGCGCTCTAATTCGATTGTGCGCGCACCTACAGCATTTAACAATGTCAAGTTTGTGGTTATTTTTCTATTATTATTACTACTTACCTATAAAGGCATGTCCATATCATCTTCGGATGTTGAGGCATTATTGAAGTTCAAGAAATCATTGAAAAATGTGGTGTCCCTTAGCAGTTGGGATCCATCCATAAACCCCAAACCGCCATGCTATGGAAACACTCCAAATTGGGTAGGCTTACTTTGTTTGAATGATAAGGTGTGGGGGCTACGCCTTGAGAGCATGGGTTTAACCGGTAATATTGATTTGGAATCTCTTGCTTCAATGTCTTCATTGCGAACCCTTAGTTTGATGAACAATACCTTTGTGGGTCCATTGCCTAACATCAATATGTTGCCCAATTTGAAGGCCCTTTACTTGTCTTATAACCATTTCTCAGGGTTCATACCCGACAATGCATTTATGGATTTACATAGGTTGAGGAAATTGTATTTATCTAATAACGAGTTTACTGGTAAAATTCCATCATCTATATCTACTTTGCCTATTCTCGTCGTCCTTAGACTTGACTCAAACAAGTTTAAAGGCGAGATACCCAATTTTGAACAGAAGAATAACCTCAAGATTATCAACTTCTCTAACAATGAATTAGAGGGTCCTATCCCGCCTAATCTAAGAACTTTTGATCCATCTTCGTTTAGTGGAAACGTGCTTTTATGTGGGTCACCTTTGCCAAATACGTGTCAATTAGATGCAATAGGAAATGAGAATGGTATTATGTCTAAAATGTTTGTTATGAATATTTTACTTATAGTGATCATGATAGCATTTGTAATATCCATTATGGTTTCAATATTTGTCATATGTCGCTTGAGGTCCCAAAAGAAACAATTAGGGGATGATAATCCTTCTACAAGTTCAAAATTACACATGCAACCTTCCAGCAAATATGTTAAGCCTCTTGCTATTTATGTGAAAGTGAAAAGTCTGGCTGATCATTATGATCCCAATAGTCCTAAACCAGACCAGTATAGTCATGGTCAATCAAAAAAAGGAGAGCAAGGGAAACTTATATTCCTCCAACAAGATGGAATAGTCTTTGATTTACAAGATTTGCTAAGGTCCTCCGCTGAAATTCTAGGTAGTGCCTCATTTGGGTCATCCTACAAAGCTGTGATTTTAGACGGTCAAGCCGTGGTTGTAAAGAGGTATAAGAAAATGAACAATGTGTCAAGAGAAGAGTTTCATGAGCACATGAGAAGGATAGGAAACCTCAACCATCCCAATGTTCTACCTCTACTCGCTTTTTATTATAGAAGAGAAGAGAAACTTTTGATCTCATCCTTTGTTCACAACGGTTGCTTGGCTAGTAACCACACCTCCCAAAAGCCAGGACTTGATTGGACAACCCGTTTGAAAATTGTTAAAGGTGTATCAAGGGGTTTGTCTTATCTATATAGTGCACTTCCAAGCGTGATTGTTCCTCACGGTCATCTTAAATCTTCCAATGTACTTTTAGATGAAACCTTTGAACCTTTAATCACTGATTATGGCCTCAGTCCATTGATAAATCTTGATCACGCCCAACAAATCATTATGCCTTACAAATCCCCAGAGTATGCTCAACTTGGACGCATCACAAAGAAAACAGACGTGTGGAGTTTTGGAATTCTAATATTGGAGATCCTAACAGGTAAATTCCCAGAGAATTATATTACAGCCAAGTATAAAAATGATTCTGATTTAGCAAGTTGGGTAAATATGATGATTACCGAGAAGCGCACGGGTGATATATTTGACGTAGATATGGGAGGAATCGGAAATAGTAAATCTGAATTGCTTAAACTGTTAAAGATTGGACTTAGTTGTTGTGAGGAGAATGTAGAAAGAAGGTTGGACATCAAAGAGGTTCTAGTGCAGATTGAAGAATTGAATGATATTGGAGTCGGAGAATACTCTTCCTCCCTTTTCACAAATGAAAGGGATGCTTACAGAGCTGTGTGA 2007 0.3802 MGARSNSIVRAPTAFNNVKFVVIFLLLLLLTYKGMSISSSDVEALLKFKKSLKNVVSLSSWDPSINPKPPCYGNTPNWVGLLCLNDKVWGLRLESMGLTGNIDLESLASMSSLRTLSLMNNTFVGPLPNINMLPNLKALYLSYNHFSGFIPDNAFMDLHRLRKLYLSNNEFTGKIPSSISTLPILVVLRLDSNKFKGEIPNFEQKNNLKIINFSNNELEGPIPPNLRTFDPSSFSGNVLLCGSPLPNTCQLDAIGNENGIMSKMFVMNILLIVIMIAFVISIMVSIFVICRLRSQKKQLGDDNPSTSSKLHMQPSSKYVKPLAIYVKVKSLADHYDPNSPKPDQYSHGQSKKGEQGKLIFLQQDGIVFDLQDLLRSSAEILGSASFGSSYKAVILDGQAVVVKRYKKMNNVSREEFHEHMRRIGNLNHPNVLPLLAFYYRREEKLLISSFVHNGCLASNHTSQKPGLDWTTRLKIVKGVSRGLSYLYSALPSVIVPHGHLKSSNVLLDETFEPLITDYGLSPLINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYITAKYKNDSDLASWVNMMITEKRTGDIFDVDMGGIGNSKSELLKLLKIGLSCCEENVERRLDIKEVLVQIEELNDIGVGEYSSSLFTNERDAYRAV* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7066 668 Pfam Leucine rich repeat 134 195 IPR001611 GO:0005515
Psa5g7066 668 Pfam Protein kinase domain 378 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g7066 668 Gene3D Phosphorylase Kinase; domain 1 345 450 - -
Psa5g7066 668 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 648 - -
Psa5g7066 668 SUPERFAMILY L domain-like 68 237 - -
Psa5g7066 668 Gene3D Ribonuclease Inhibitor 204 249 IPR032675 -
Psa5g7066 668 SMART LRR_typ_2 158 182 IPR003591 -
Psa5g7066 668 SMART LRR_typ_2 133 157 IPR003591 -
Psa5g7066 668 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 15 648 - -
Psa5g7066 668 Gene3D Transferase(Phosphotransferase) domain 1 451 654 - -
Psa5g7066 668 ProSiteProfiles Protein kinase domain profile. 375 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g7066 668 SUPERFAMILY Protein kinase-like (PK-like) 378 644 IPR011009 -
Psa5g7066 668 Gene3D Ribonuclease Inhibitor 38 203 IPR032675 -
Psa5g7066 668 Pfam Leucine rich repeat N-terminal domain 39 83 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g7066 Psa-Chr5 577813267 577816247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7066 37 622 Receptor kinase-like Gene Family AT1G50610 47.776 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa5g7066 Pkinase 3.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7066 - - aprc:113854862 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g7066 5 577813267 577816247 Psa5g7066 5 577813267 577816247 ECH