Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7059 ATGCCTTCAAGACAATTCCCTTCATCAAGTTCCAATCTTTTTACCAAACCCAAGTTTCTATTCATAGCACTCACCATTTCAGCTTCTGTGGTCATTGTGTTTTCAATTCTCTACTTTCTTTACCATCTTTGGCTTTCTCTTGTTCATAGAGCTAAGACTATACCTTATGATGCTAGTGCTCCTTTGAAGCTGCAGAGATTCTCTTACAAGGATTTAAAGCTTGCTACCAATGGTTTTGACACTGCCAATGTCATTGGCAAAGGTGGTTCTGGTACTGTTTTTAAGGGTGTGCTTAAAGATGGAAAATTTATTGCTATCAAGTGTTTGGATTCTTTGTCTTTGCAATCTGAGAGAGAGTTTCAGAATGAGTTGCAGATTCTTGGAGGGTTGAGATCACCTTTTTTGGTGACCCTTTTGGGCTATTGTGTTGAAAAGAATAAGAGGATTTTGGTGTATGAGTATATGCCTAATGCAAGCTTGCAAGAGTCACTTTTTGGTGATGAGTGTTTTGGTTTGAGTTGGGAGAGAAGGTTTTGTGTCATAATGGATGTTGCTAGAGCATTGGAGTTTTTGCACCTTGGATGTGATCCACCTGTGATTCATGGTGATATTAAGCCAAGCAATGTGTTGCTTGATTCCGAGTTTCGCGGGAAGATCTCGGATTTCGGGTTGTCAAGGATTAAGGTGGAGGGTGAATTTGGAGTTGATTTGTTTAGCCAGGATTTGGGGAAGAGTCAGGATCTTTGGAAAAGTCAGGATCTTTCAGGTAATTTGACAGTAGAAACTCCTGTAATTGGTACTCCTGTTGAGAGTGTTAGTGAAGTTGATTTTGCTCTTGCTTTGCAAGCTTCGTCTTCGTCGAAAAATAGTAGGACTTGTTTAAATGGTAAAGCTTTGAAATTGAACTCTTTGAATTATAATGCTAATATTGTTGGTGAGAGTGAAAGTAGGAATTTAGATGCAAAAGGTAAAGAAGTTTCAAGTTTCGATATGTTTGTTCCTAATGATGATGAGTTTTGTAGCAATGATTATAGTAAGGATTTGGCTGTTAATAATGCTTGTTTGGTTGATGATGAGAAGGAAAATGGGAAACAATGGGGGAAAGATTGGTGGTGGAGACAAGATGGAAGTGGTGAATTGTGTAGTAAAGATTATGTTAAGGAATGGATTGGGAGTCAGATTTGTCCATCGAATGCTGATTGGGATGATGACGGTATCGCGAATACTAAGGACATGAACAGCATTCAGGAGAAATCTGAGTTGGAAAATTCAAGTCCAATAGATAAAGGTAATAATGATGCAATTGTAAATGGAACTCGGTTACATGTTTCTGCGACGGAAGATACTGATAATGGAGTTGTTGATATGAAAGAGGTGAAAGGAAAGAAAAACCAGAAGAAGAAGAAGATGAAGAAGAATAGGAAGATGCAAGAATGGTGGAAAGAAGAACATCTTGATGAGTTAAGCAAGAAGAAGAGAAACAAGCTGAGAAGTCTTGAAACGAAATGGAAGAAAGGGTTGAAATTGAAAGTTCCGCGATTTGGCTTAGGTAGAAGGTTCTATCATTGTGAAAGTGATAAGAACTATGGAGGAGAGGAAGGACCGAACGAGTGCGAGCAAAACGGCGAGTTTAGCTTCAGGAGAGGTTGGAGGAAGAAAAGCTCGCGCTCGATGGGAAGTGATATGTGGAGTGGCGATCTTTTCAGCCGCGAACTGAGCAGCACGACTAGTATGAGAGGGACATTATGTTATGTTGCGCCGGAGTATGGAGGGTGTGGATTCTTAATGGAGAAAGCGGATATATACAGTTTCGGAGTTTTGATGCTTGTGATTATATCAGGTAGAAGACCATTACATGTTCTTGCATCTCCAATGAAGTTAGAGAAAGCGAATTTGATAAGCTGGTGTAGACATTTGGCTCAGGCTAGTGGCAGTAACATTTTGGAACTAGTTGATGAGAAATTGAGAGATTACAATAAGGAACAGGCAAGTTTGTGTATCAACTTGGCACTCATTTGTTTACAGAAAATTCCGGAGTTGAGGCCGGATATCGGCGACATTGTTAAGATTTTGAAAGGGGAGATGGAGCTTCCGCCGCTTCCGTTCGAGTTCTCGCCGTCTCCGCCGTCCAGATTATACAGCAGATCAAGATCAAGGAGGAAACAGAAGGGCAATGCAGAAGTATAG 2187 0.4033 MPSRQFPSSSSNLFTKPKFLFIALTISASVVIVFSILYFLYHLWLSLVHRAKTIPYDASAPLKLQRFSYKDLKLATNGFDTANVIGKGGSGTVFKGVLKDGKFIAIKCLDSLSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRILVYEYMPNASLQESLFGDECFGLSWERRFCVIMDVARALEFLHLGCDPPVIHGDIKPSNVLLDSEFRGKISDFGLSRIKVEGEFGVDLFSQDLGKSQDLWKSQDLSGNLTVETPVIGTPVESVSEVDFALALQASSSSKNSRTCLNGKALKLNSLNYNANIVGESESRNLDAKGKEVSSFDMFVPNDDEFCSNDYSKDLAVNNACLVDDEKENGKQWGKDWWWRQDGSGELCSKDYVKEWIGSQICPSNADWDDDGIANTKDMNSIQEKSELENSSPIDKGNNDAIVNGTRLHVSATEDTDNGVVDMKEVKGKKNQKKKKMKKNRKMQEWWKEEHLDELSKKKRNKLRSLETKWKKGLKLKVPRFGLGRRFYHCESDKNYGGEEGPNECEQNGEFSFRRGWRKKSSRSMGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLMLVIISGRRPLHVLASPMKLEKANLISWCRHLAQASGSNILELVDEKLRDYNKEQASLCINLALICLQKIPELRPDIGDIVKILKGEMELPPLPFEFSPSPPSRLYSRSRSRRKQKGNAEV* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7059 728 Pfam Protein kinase domain 81 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g7059 728 PANTHER OS08G0275200 PROTEIN 1 723 - -
Psa5g7059 728 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Psa5g7059 728 Gene3D Transferase(Phosphotransferase) domain 1 155 268 - -
Psa5g7059 728 Gene3D Transferase(Phosphotransferase) domain 1 502 697 - -
Psa5g7059 728 ProSiteProfiles Protein kinase domain profile. 79 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g7059 728 Gene3D Phosphorylase Kinase; domain 1 47 154 - -
Psa5g7059 728 SUPERFAMILY Protein kinase-like (PK-like) 58 711 IPR011009 -
Psa5g7059 728 SMART serkin_6 79 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g7059 728 MobiDBLite consensus disorder prediction 706 728 - -
Psa5g7059 728 PANTHER OS07G0586332 PROTEIN 1 723 IPR044576 -
Psa5g7059 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g7059 Psa-Chr5 577479703 577482785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7059 558 691 Receptor kinase-like Gene Family AT3G58690 31.618 9.61e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Psa5g7059 Pkinase 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7059 - - ccaj:109812677 1067.76