Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7019 ATGCCTGCCGCCTCCGCCGCCGCCGCTGCAGAACCTTCACCAATCTCCGGCCAAACCATATGCGTCACCGGCGCCGGCGGATTCATCGCTTCATGGATGGTTAAACTCCTCCTTGAAAAAGGCTACACCGTCAGAGGAACCTTGCGAAACCCAGATGATGCAAAAAATGGACACTTGAAAGAGTTGGAAGGAGCGAAGGAGAGACTAACTCTGCATAAAGTTGATCTACTTGATCTTAACTCCGTTAAAGCTGCCGTTCACGGTTGTCACGGTGTTTTTCATACTGCTTCTCCCGTTACCGATAACCCCGAAGAGATGGTGGAGCCTGCAGTAAATGGAGCAAAGAATGTAATCATAGCTGCTGCAGAAGCAAATGTGAGGCGCGTGGTTTTCACTTCCTCAATTGGCGCAGTCTATATGGACCCAAAGAGAAGTGTTGATGTTGAAGTTGACGAGTCTTGTTGGAGCGATTTGGAATTTTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAAGCAGTGGCGGAACAAGCAGCATGGGATATAGCAAAAGAGAAAGAAGTAGATTTGGTTGTAGTGAATCCAGTTTTGGTTCTTGGACCATTGCTACAACCCACAATCAATGCAAGCACAATTCACATACTAAAGTACTTAACTGGATCTGCAAAAACCTATGCAAATGCAACACAAGCTTATGTTCATGTCAGGGATGTGGCATTAGCACATATACTTGTTTATGAAAAACCTTCTGCTTCTGGTAGATACTTATGTGCTGAAAGTTCATTGCACCGTGGAGAGCTTGTTGAAATTCTGGCTAAGTATTTTCCTGAATACCCGATTCCTACCAAGTGTTCAGATGAAAAGAATCCTAGAGTGAAACCACATATCTTCTCAAACAAAAAACTGAAAGATTTGGGATTGGAATTCACTCCAGTGAGTCAATGTTTATATGAAACCGTTAAGAGTCTGCAAGAGCAAGGTCACATTCCTGTTCCAAAGAAAGATGATTCTCTAGCAGTCAAATCTTAA 1029 0.4363 MPAASAAAAAEPSPISGQTICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDAKNGHLKELEGAKERLTLHKVDLLDLNSVKAAVHGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEANVRRVVFTSSIGAVYMDPKRSVDVEVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWDIAKEKEVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRVKPHIFSNKKLKDLGLEFTPVSQCLYETVKSLQEQGHIPVPKKDDSLAVKS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7019 342 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 14 333 - -
Psa5g7019 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 324 IPR036291 -
Psa5g7019 342 CDD FR_SDR_e 21 307 - -
Psa5g7019 342 Gene3D - 10 342 - -
Psa5g7019 342 Pfam NAD dependent epimerase/dehydratase family 20 251 IPR001509 -
Psa5g7019 342 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 14 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g7019 Psa-Chr5 573792817 573796470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7019 15 283 Monolignol Biosynthesis Gene Families AT1G80820 74.349 1.92e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7019 K09753 - gmx:100789070 588.571