Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g7017 ATGGAGCATATTAATAATGAGGAAATTCCATCAGCACCAGCAACACCAGGCACTCCTGGTGTACCTCTTTTTGGTGGTTTTAAGTCAGAGAGAAACGGGCATGGTAGTAATAAGAAAAATAAGTCCCTCCTGAAGAATTGTCAATGCTTTGGTGTCAAAGAATGGACCTTAGAAGACGGAGCTCTACCCACAGTCACTTGCTCATTAATGGCGCCCCCTCCTGTCCCTCTAGCAAAAAAGATCGGAGCTGAGTTTATAGGGACATTGATTCTGATGTTTGCTGGGACAGCCACTGCTATTGTGAACCAAAAGACAAACGGGTCGGAGACTCTGATTGGATGTGCTACTTCTACTGGTCTTGCTGTTATGATCATCATCCTTTCCACAGGCCACATCTCCGGTGCTCATCTCAACCCTGCAGTCACAATTTCCTTTGCTGCATTGAAGCACTTCCCGTGGAAGCATGTGCCTATGTACATTGGAGCACAAGTTTTGGCATCAATATGTGCCGCATTTACTCTCAAAGGGGTTTTTCATCCTTTCATGAGTGGTGGAGTCACTGTTCCTTCCGGTGGATATGGCCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTTAACCTCATGTTCGTTGTCACCGCAGTAGCCACTGACACAAGAGCTGTAGGAGAACTAGCAGGAATTGCGGTTGGAGCCACTGTGATGCTCAATATACTCATAGCAGGACCAATAACAGGAGCGTCAATGAACCCAGTAAGAACTCTAGGTCCAGCTATTGCTGCAAACAACTACAAAGCCATATGGGTCTATCTATTAGCTCCCATACTTGGAGCTCTAGGTGGGGCGGGTACTTATACCGCAGTCAAGCTACCCGAAGAAGATGATAAGACAAAATCTAATGTTTCTTCAAACCACCCCAGCTTCACAAGACGATGA 933 0.4577 MEHINNEEIPSAPATPGTPGVPLFGGFKSERNGHGSNKKNKSLLKNCQCFGVKEWTLEDGALPTVTCSLMAPPPVPLAKKIGAEFIGTLILMFAGTATAIVNQKTNGSETLIGCATSTGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQVLASICAAFTLKGVFHPFMSGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPITGASMNPVRTLGPAIAANNYKAIWVYLLAPILGALGGAGTYTAVKLPEEDDKTKSNVSSNHPSFTRR* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g7017 310 SUPERFAMILY Aquaporin-like 76 293 IPR023271 -
Psa5g7017 310 PANTHER AQUAPORIN NIP2-1 7 299 IPR034294 -
Psa5g7017 310 CDD MIP 79 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa5g7017 310 Pfam Major intrinsic protein 77 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa5g7017 310 ProSitePatterns MIP family signature. 136 144 IPR022357 -
Psa5g7017 310 Gene3D Glycerol uptake facilitator protein. 71 300 IPR023271 -
Psa5g7017 310 PANTHER BNAA02G36290D PROTEIN 7 299 - -
Psa5g7017 310 PRINTS Major intrinsic protein family signature 79 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa5g7017 310 PRINTS Major intrinsic protein family signature 118 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa5g7017 310 PRINTS Major intrinsic protein family signature 155 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa5g7017 310 PRINTS Major intrinsic protein family signature 199 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa5g7017 310 PRINTS Major intrinsic protein family signature 230 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa5g7017 310 PRINTS Major intrinsic protein family signature 267 287 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g7017 Psa-Chr5 573714868 573719960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g7017 4 301 Major Intrinsic Protein MIP AT1G80760 78.218 5.84e-167 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g7017 K09874 - gmx:100815637 489.189