Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6991 ATGTCCAATCGGAATGATTCTAGTTATTCTTCAATACCTGTTTCATCATCGTATCTAGAACTACAGCCTCAGGATGATTCATTTAATTCTTTTCAAAGATTGTCTTTTGATGAGGGTGGAGGGTTTTTGAGATCTAAGGTTGATGATGATGATGAGGAGGCTGATAATTTTGAAATTGATGTTGATAATTATCCTCTTGTTGTTGGGCCTAATCCCAATCATGGTTCTGGTATTCCTGGTGCTGTGTTTAATTTAACTACTACTATTATTGGGGCTGGACTTATGGCTCTTCCTGCTACAATGAAAGTTCTTGGAGTTTTTTTAGGGATTGTGTTGATTGTTTTAATGGGGATTTTGTCGGAAATTAGCGTCGAATTGTTGATTCGTTTTTCTGTTTTGTGTAAAGCGTCTTCTTATGGCGAGGTTGTTCAGCATGCTATGGGAAGACCTGCTAGGATTTTGTCTGAAATTTGTATTATTTTGAATAATGCCGGTGTTTTGGTTGTTTATTTGATTATAATGGGAGATGTTATGTCGGGTTCTGTTCATCATTTAGGCGTTTTTGATCAGTTAATGGGGAACGGGGTTTGGGATCAGAGGAAGCTTGTGATTCTCGTTGTTATGGTGATTTTTTTAGCGCCGTTATGTTCGCTTGATAAGATTGATTCGTTGAGCTTGACTTCAGCTGCGTCGGTTGCTCTTGCTGTTATGTTTGTTGTTGTTGCTTTCGTTGTTGCTTCCATTAAGCTTGTTGAAGGAAAGATTGATGCTCCAAGGATGGTTCCTGATTTAAGTTCGAAAAAGGCTATTTTGGATTTGCTTGTGGTGATTCCTATCATGACAAATGCGTATGTTTGTCATTTTAATGTGCAGCCGATATACAACGAGCTTGAAGGTAGGTCACCGCAGAAGATGAACCGAGTAGGAAGGTTCACCATGATTTTGTGCATCCTGGTTTATGCTGCAACAGCGTTATCTGGTTATCTGTTATTCGGGGAAGATACTGACTCCGACGTCCTGACTAATTTTGATAAGGATCTTGGAATCCGGTTTAGTTCGGCCCTGAACTATATTGTTAGAGTCGGCTACATTCTCCATTTGATACTTGTCTTCCCCGTTATTCATTTCTCACTACGTCAAACGGTGGATACATTGATTTTCGAGGGGTCACCTCCTTTAACAGAAAGCAAGAAGAGATCGCTAGGGCTGACTTTGGTTCTGTTGATCCTCATATACATCGGGTGTACCATGATACCAAACATTTGGACAGCTTTTAAGTTCACTGGCGCAACTACGGCGGTTTCGCTAGGTTTCATATTTCCGCCTCTTGTTGCAATAAGATTAAGCCATAAAGGAGATTTGAGTCATGTAGAAATGATTTTGTCGTGGTTAATGTTGGTATTGGCCGTGACTGTTAGCATCGTAGGAGTCGTCAGCAATATATATAGCCTCGAGAGTAAGTCTTAG 1467 0.4015 MSNRNDSSYSSIPVSSSYLELQPQDDSFNSFQRLSFDEGGGFLRSKVDDDDEEADNFEIDVDNYPLVVGPNPNHGSGIPGAVFNLTTTIIGAGLMALPATMKVLGVFLGIVLIVLMGILSEISVELLIRFSVLCKASSYGEVVQHAMGRPARILSEICIILNNAGVLVVYLIIMGDVMSGSVHHLGVFDQLMGNGVWDQRKLVILVVMVIFLAPLCSLDKIDSLSLTSAASVALAVMFVVVAFVVASIKLVEGKIDAPRMVPDLSSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELEGRSPQKMNRVGRFTMILCILVYAATALSGYLLFGEDTDSDVLTNFDKDLGIRFSSALNYIVRVGYILHLILVFPVIHFSLRQTVDTLIFEGSPPLTESKKRSLGLTLVLLILIYIGCTMIPNIWTAFKFTGATTAVSLGFIFPPLVAIRLSHKGDLSHVEMILSWLMLVLAVTVSIVGVVSNIYSLESKS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6991 488 PANTHER AMINO ACID TRANSPORTER 44 487 - -
Psa5g6991 488 Pfam Transmembrane amino acid transporter protein 76 478 IPR013057 -
Psa5g6991 488 PANTHER BNAC06G40470D PROTEIN 44 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6991 Psa-Chr5 572703792 572706173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6991 6 488 Amino Acid or Auxin Permease AAAP Family AT1G80510 72.414 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6991 - - gmx:100791860 755.747