Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6986 ATGGCAGTTATTTCCCTCTCTCTTCTTCCTCCTCCTTCTACTACTCATTCTTGCTTCTGTGCCTCCGGAATCCATTTCCGTTCCCACACCACCACCAACAATTTCCTTTCCATTCATTCTCCTTCTCCTTTTCCTTCTACTTTCTCTAACTCTAATTCTAAATTCTCCGCTAGAAGAAAACGATTTCACACTGTTTTTGCCGCTTCTTCTGATTATTACGCTACTCTCGGAGTTCCCAAATCCGCCACCGTCAAAGATATCAAAGCCGCTTATCGAAGGTTAGCTCGTCAGTATCATCCTGATGTGAACAAAGAGCCTGGTGCAACGGATAAGTTTAAAGAGATTAGTAATGCTTATGAGGTGCTATCAGATGACAAAAAGAGGGCTTTGTATGATCAATATGGCGAGGCAGGGGTTAAGAGCTCAGTGGGAGGAGGATCAAGTGCCTATGCGACAAATCCATTTGACTTATTTGAGACATTTTTTGGGTCAAATATGGGCGGCTTTGGTGGCATGGATCCAACTGGATTTGGCACACGGCGTCGTAGTACAGTTACTAAGGGCGAAGACATCCGGTATGATTTCTCCTTGGAGTTTTCTGAGGCAATTTTCGGAGCAGAGAAAGAATTCGAGCTTTTCCATTTAGAAACATGTGAAGTCTGTACTGGTACTGGTGCAAAGTTAGGATCCAAGATGAGAGTATGTTCAACTTGTGGTGGCAGGGGTCAGGTGATGAGGACCGAACAAACACCTTTTGGGTTGTTCTCACAGGTTTCAGTATGTCCAAACTGTGGAGGTGATGGTGAAGTCATATCTGAAAATTGCCGTAAATGCAGTGGTGCAGGACGCATACGGGTTAAGAAAAATATGAAAGTTAAAGTTCCTCCCGGGGTTAGCTCAGGCAGTATCTTAAGAGTCACTGGAGAGGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGATCTTTACGTATATCTTGACGTGCTTGAGATACCAGGAATTCAAAGAGATGACATTAATCTCCGCTCAACAATATCAATCACTTATCTAGATGCTATATTGGGGTCTGTAGTGAAGGTAAAGACAGTTGAAGGCACTTCTGAACTACAAATCCCTTCTGGTACTCAACCTGGAGATGTCCTCGTCCTTGCAAAGAAGGGTGTACCAAAATTAAACAGACCATCAATACGTGGTGACCACTTATTTACTGTTAAAGTTACAATACCAAAACGTATCAGTTCAAAGGAGCGTGAGGTGCTTGAAGAACTTGCTTCTCTAGGTGGCACAAGCAGTCATTCAAGATCCCGTCCTAGGACCCAACCTTCCACCGGAAGTAAGGAAGCTCCTGCAGCTCAAAGGGCCGAAAGTCCAACAGAAACAGTCACAGAAAAACCAGAGAAATCAGAAGAAGAAGATGATGACTTATGGAACAAACTAAAGAACATGGCTGGGTCTGTGGCAAATGGAGCTCTAAAGTGGTTTAAAGATAATCTCTAG 1497 0.4402 MAVISLSLLPPPSTTHSCFCASGIHFRSHTTTNNFLSIHSPSPFPSTFSNSNSKFSARRKRFHTVFAASSDYYATLGVPKSATVKDIKAAYRRLARQYHPDVNKEPGATDKFKEISNAYEVLSDDKKRALYDQYGEAGVKSSVGGGSSAYATNPFDLFETFFGSNMGGFGGMDPTGFGTRRRSTVTKGEDIRYDFSLEFSEAIFGAEKEFELFHLETCEVCTGTGAKLGSKMRVCSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISENCRKCSGAGRIRVKKNMKVKVPPGVSSGSILRVTGEGDAGPRGGPPGDLYVYLDVLEIPGIQRDDINLRSTISITYLDAILGSVVKVKTVEGTSELQIPSGTQPGDVLVLAKKGVPKLNRPSIRGDHLFTVKVTIPKRISSKEREVLEELASLGGTSSHSRSRPRTQPSTGSKEAPAAQRAESPTETVTEKPEKSEEEDDDLWNKLKNMAGSVANGALKWFKDNL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6986 498 Gene3D - 188 324 - -
Psa5g6986 498 Hamap Chaperone protein DnaJ [dnaJ]. 68 482 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Psa5g6986 498 SUPERFAMILY Chaperone J-domain 67 177 IPR036869 -
Psa5g6986 498 PANTHER MOLECULAR CHAPERONE HSP40/DNAJ FAMILY PROTEIN 59 438 - -
Psa5g6986 498 CDD DnaJ 71 124 IPR001623 -
Psa5g6986 498 Gene3D - 334 426 - -
Psa5g6986 498 PRINTS DnaJ domain signature 73 91 IPR001623 -
Psa5g6986 498 PRINTS DnaJ domain signature 91 106 IPR001623 -
Psa5g6986 498 PRINTS DnaJ domain signature 107 127 IPR001623 -
Psa5g6986 498 PRINTS DnaJ domain signature 127 146 IPR001623 -
Psa5g6986 498 Pfam DnaJ central domain 218 282 IPR001305 GO:0031072|GO:0051082
Psa5g6986 498 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Psa5g6986 498 Gene3D - 218 282 - -
Psa5g6986 498 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 420 IPR008971 GO:0006457|GO:0051082
Psa5g6986 498 ProSiteProfiles dnaJ domain profile. 71 135 IPR001623 -
Psa5g6986 498 MobiDBLite consensus disorder prediction 459 478 - -
Psa5g6986 498 Pfam DnaJ domain 71 132 IPR001623 -
Psa5g6986 498 TIGRFAM DnaJ_bact: chaperone protein DnaJ 71 425 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Psa5g6986 498 Pfam DnaJ C terminal domain 191 409 IPR002939 -
Psa5g6986 498 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 205 285 IPR036410 -
Psa5g6986 498 ProSiteProfiles Zinc finger CR-type profile. 205 287 IPR001305 GO:0031072|GO:0051082
Psa5g6986 498 SMART dnaj_3 70 127 IPR001623 -
Psa5g6986 498 SUPERFAMILY HSP40/DnaJ peptide-binding domain 186 336 IPR008971 GO:0006457|GO:0051082
Psa5g6986 498 MobiDBLite consensus disorder prediction 423 480 - -
Psa5g6986 498 CDD DnaJ_C 189 412 - -
Psa5g6986 498 Gene3D DnaJ domain 67 173 IPR036869 -
Psa5g6986 498 MobiDBLite consensus disorder prediction 426 449 - -
Psa5g6986 498 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 59 438 - -
Psa5g6986 498 CDD DnaJ_zf 218 282 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6986 Psa-Chr5 572462774 572472548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6986 72 134 C2H2 Transcription Factor Family AT1G74250 46.377 4.29e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6986 K03686 - gmx:100798567 759.985