Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6975 ATGGATTGTGGTGGAAATCAGGTTTCAAACACCATCTATGTTAACCAACAAGGTAAAGGAAATTTTCAAACAATTCAAGCTGCCATTGATTCTATAAAGAATCAAAATGATAAATGGATTGTGATTAATATAAGTAGTGGCATATACAAGGAAAAAGTTCATATACCTCAGGGAAAGCCATGCATTGTTTTAAAAGGAGTAGGTAGAGGTAGCAGAGGCACAACCATTAGGTATGACGATTCATCTCATCATGTTGGAACATCCATGAGTGCTACACTCATTTCAAGTCCTCCTAATGTCCTTGTCACTAACATTAAATTTGAGAACACGTTTGGACCTAATGGACCAGCAGTAGCAGCTAATTTTTATGGCGATAAATCAGCCATATTTGATTCTAGTTTCATTGGTTATCAAGATACATTGCTTCTATCCTCTGGACGTTCTTACTTTAAAAATTGTTATATTCAAGGGGAAGTCGACTTTATTTGTGGTTCTGGACAATCTTATTTCGAGAATTGTGTGATGAATGCAACACAAGCGCAAAATAAACCTCCTGGTTTTGTGACAGCACAAATGCGAAACTCACCAGAAGGAAAAGAAGGGTTTGTCTTTAAAGGAGGTTCCATTGTTGGAAATGGTCAGGTGAATCTTGGAAGGCCATGGGGTTTTTACTCGAGAGTCATATATTGGGACACATATTTTTCATCCGTAGTAATGCCTAAAGGATGGGACCCTTGGGATAAAGAAAGTCATGTAAAAGACATCACGTTTGCAGAAATTAATTGTAAGGGACCAGGAGCTGATACTAAGAATCGTGTTAATTGGATGAAGAAAGCAGAGGACATCAATAAAAGTGAATATACTTATTCGTCTTTCATAAATTCAGATGGATGGCTCAATAACTTACCTAGCGTATAA 918 0.3704 MDCGGNQVSNTIYVNQQGKGNFQTIQAAIDSIKNQNDKWIVINISSGIYKEKVHIPQGKPCIVLKGVGRGSRGTTIRYDDSSHHVGTSMSATLISSPPNVLVTNIKFENTFGPNGPAVAANFYGDKSAIFDSSFIGYQDTLLLSSGRSYFKNCYIQGEVDFICGSGQSYFENCVMNATQAQNKPPGFVTAQMRNSPEGKEGFVFKGGSIVGNGQVNLGRPWGFYSRVIYWDTYFSSVVMPKGWDPWDKESHVKDITFAEINCKGPGADTKNRVNWMKKAEDINKSEYTYSSFINSDGWLNNLPSV* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6975 305 SUPERFAMILY Pectin lyase-like 8 301 IPR011050 -
Psa5g6975 305 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 304 - -
Psa5g6975 305 Pfam Pectinesterase 12 295 IPR000070 GO:0030599|GO:0042545
Psa5g6975 305 PANTHER PECTINESTERASE 1 304 - -
Psa5g6975 305 Gene3D - 5 303 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6975 Psa-Chr5 572249577 572250942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6975 2 249 Carbohydrate Esterase AT2G19150 45.914 9.55e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6975 - - mtr:MTR_5g088290 367.081