Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6957 ATGATGGGGTTATTCAAAAATGAAACTTTGTTTTTGTATATTGTGATGCTACTTCTGTTAAGAACCTGTCAAGCCAAAGATCAACACATTCACCAGATACAGCCTGGATTCAGTGCATCTCGTTCGGATTGGAATGATCATAACGGTTTCTTTTTACTATCGAACAACTCGGCTTTTGCTTTTGGATTCTTCACAACCCTTGATGTTTCTTTGTTTGTTTTAGTAGTCATTCATTTGAGTAGCTTCAAAGTTGTTTGGACAGCAAATAGAGGCTTTCTTGTAAGAAATTCTGATAAGTTCGTGTTTGAGAATAGCGGAAATGTTTATTTGGAAAGTGGAAATGGTTTTGTTTGGGCAACAAACACGACAGGACAGAAAGTTAAGGACATGGAGTTGTTGGATTCAGGAAATTTGGTTTTGTTTGGGGAAAATAGGAAAATTGTTTGGCAGAGTTTTAGTCATCCTACTGATACACTTTTGCCTGGTCAATCCTTTGTTGAAGGAATGAGTCTTAGGAGTTTTCGGAATCGAATGAACTTGTTTCATTTTCTCGGTTATGTAGAAGGTGATTTGGTTCTGTATGCAGGATTTGAAACTTCGCAATTGTATTGGTCCTTAATGGGAGAAGTTAGTAAAACTCGAAGTTCGAAAAATGTTACAAGTAGTAAAAAGGTTCACTATGCTTCTTTGGTTTCTAATTCATGGAACTTTTATGATAAAAATGGAGTTTTGGTTTGGAAAATTGTGTTTTCTGATCATTCAGATCCTAACTCATTCTATGCTGCAATTTTGGATCCAAATGGTGCAATTTCTTTCTATGATCTTAACAAAGGAAAGTCTACTAATCCTGAGATATTGAAATTGCCACAAGACCCTTGTGGAATTCCTGAGCCTTGTGACCCTTACTATGTTTGTTTCTTTGAGAATTGGTGTGAGTGTCCTACGCTTCTTCGGTCGCGTTTCAATTGCAAACCTCCTAACGTCTCCGCGTGTTCTCGTGGAAGTTCGACAGAACTTTTATATGTTGGTGAAAATCTTGATTATTTTGCACTTAAATATGAAGCACCTGTTTTAACAAAATCGACCTTGAATTCGTGCAAAGAGGCTTGTGTAAGAAACTGTTCTTGCCTTGTGCTTTTCTACGAAAACAGTACAGGTAGTTGCTTTCTTTTCGAGCAAACCGGGAGCTTCCAACGGTTTAAAGGAAGCAGCGGCGGTTATGTTTCGTATATGAAGGTTTCGACTGATAGTGGTGGAAATGACGGCGATGATCGTGGAAGAAAGACCATGCTGCTAGTTTTTGTTATAGGGATTCTCACAGTTTTGGCCATTTTCGGTCTTATAGCTGGATTCTGGTGTTACTATTTCAAGAAGAGGAAGAACTTTGATGAGTATCCTCAAGAAGATACTTTAGAGGAAGATGAATTCTTTGATAGTCTCTCTAATATGCCGGCGCGTTTTACTTATAGAGCGCTTGCTAGAGCAACTAAGGACTTCTCCACGAAAATCGGCGAAGGAGGTTTCGGCTCGGTGTATCTAGGTGTACTTGAAGATGGTAAGACACAATTGGCAGTGAAAAAATTGGAAGGTGTAGGACAAGGAGCAAAAGAGTTCAAAGCAGAAGTATCGATAATCGGAAGTATTCACCATGTTCATCTTGTGAAGCTTAAAGGGTTCTGCGCCGAAGGTCCTCATCGAATGCTTGTTTATGAATACATGGCAAGAGGTTCATTGGATAAATGGATCTTCAAAAACAGCGAAAACACTATGTTGTTAACTTGGGAAACAAGGTACAATATTGCAATAGGCACTGCAAAAGGATTGGCCTATCTTCATGAAGAGTGTGAAGTTAGGATCATTCATTGCGATATCAAACCGCAAAATGTTCTTCTTGATGATAATTTCATGGCGAAAGTTTCTGATTTCGGGTTGGCGAAACTAATGAGCAGAGAACAAAGTCACGTTTTCACAACTCTCAGAGGAACGAGAGGGTATTTAGCACCCGAATGGATAACTAACTACGCGATTTCAGAGAAGAGTGATGTGTTTAGCTACGGAATGCTTTTGCTTGAGATTGTTGGAGGAAGGAAAAACTATGATCAATGGGAAGGAGAAGAGAAAGCGCATTTTCCTTCTTATGTATCAAGAATGATGGAGGAAGGGAAAATAAGAGAAGTTATCGACAAAAAGATAGATATCGATGAGGAAGATGAGAGTGTTGTGATAGCTCTTAAAGTTGCTCTTTGGTGTATACAAGATGACATGAATTTGAGACCTCCAATGAGTAAAGTTGCTCAAATGCTTGAAGGTTTGTGTATTGTAAATGATCCACCATCATTGTTACAATCTAGTAGTTATTCAAGTTTCTTGAAAATGAGTAGTGGAGAAGGTAGTTCATCAGGACAAGCTAGTTTTTATAGTAATGTTCCTTTGTCTTGTGTTCAATTATCAGGACCAAGATGA 2463 0.3845 MMGLFKNETLFLYIVMLLLLRTCQAKDQHIHQIQPGFSASRSDWNDHNGFFLLSNNSAFAFGFFTTLDVSLFVLVVIHLSSFKVVWTANRGFLVRNSDKFVFENSGNVYLESGNGFVWATNTTGQKVKDMELLDSGNLVLFGENRKIVWQSFSHPTDTLLPGQSFVEGMSLRSFRNRMNLFHFLGYVEGDLVLYAGFETSQLYWSLMGEVSKTRSSKNVTSSKKVHYASLVSNSWNFYDKNGVLVWKIVFSDHSDPNSFYAAILDPNGAISFYDLNKGKSTNPEILKLPQDPCGIPEPCDPYYVCFFENWCECPTLLRSRFNCKPPNVSACSRGSSTELLYVGENLDYFALKYEAPVLTKSTLNSCKEACVRNCSCLVLFYENSTGSCFLFEQTGSFQRFKGSSGGYVSYMKVSTDSGGNDGDDRGRKTMLLVFVIGILTVLAIFGLIAGFWCYYFKKRKNFDEYPQEDTLEEDEFFDSLSNMPARFTYRALARATKDFSTKIGEGGFGSVYLGVLEDGKTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRMLVYEYMARGSLDKWIFKNSENTMLLTWETRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFMAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEIVGGRKNYDQWEGEEKAHFPSYVSRMMEEGKIREVIDKKIDIDEEDESVVIALKVALWCIQDDMNLRPPMSKVAQMLEGLCIVNDPPSLLQSSSYSSFLKMSSGEGSSSGQASFYSNVPLSCVQLSGPR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6957 820 Gene3D Transferase(Phosphotransferase) domain 1 573 775 - -
Psa5g6957 820 Pfam Protein kinase domain 500 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6957 820 CDD PAN_AP_plant 331 414 - -
Psa5g6957 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 3 820 - -
Psa5g6957 820 ProSitePatterns Protein kinases ATP-binding region signature. 503 527 IPR017441 GO:0005524
Psa5g6957 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 205 IPR036426 -
Psa5g6957 820 SMART blect_4 43 155 IPR001480 -
Psa5g6957 820 CDD STKc_IRAK 503 771 - -
Psa5g6957 820 ProSiteProfiles Bulb-type lectin domain profile. 37 153 IPR001480 -
Psa5g6957 820 SMART serkin_6 497 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6957 820 SUPERFAMILY Protein kinase-like (PK-like) 479 769 IPR011009 -
Psa5g6957 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Psa5g6957 820 PIRSF SRK 4 816 IPR024171 GO:0004674
Psa5g6957 820 ProSiteProfiles PAN/Apple domain profile. 331 414 IPR003609 -
Psa5g6957 820 Gene3D Phosphorylase Kinase; domain 1 463 572 - -
Psa5g6957 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 820 - -
Psa5g6957 820 CDD B_lectin 48 155 IPR001480 -
Psa5g6957 820 ProSiteProfiles Protein kinase domain profile. 497 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6957 820 Gene3D - 45 154 IPR036426 -
Psa5g6957 820 Pfam D-mannose binding lectin 84 165 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6957 Psa-Chr5 570600439 570603693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6957 428 778 Receptor kinase-like Gene Family AT5G20050 43.280 2.57e-88 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa5g6957 Pkinase 3.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6957 - - gmx:100786024 1245.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6957 5 570600439 570603693 Psa5g6957 5 570600439 570603693 ECH