Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6920 ATGGAGAGCATGAGAACACCTTTCAGAGGGATTGTAAGTGATTTTAGAGGAAGAGCGTTGCATTATAAAGATGATTGGGTTTCTGGTTTCACTTCAGGAACTGGGATATTGGCACCAACTACGTATATTTTCTTTGCTTCTGCTCTACCTGTTATTGCTTTCGGCGCGCAGCTCAGTAGAGACACAGATGGAAGTTTGAGTGTTGTAGAAACATTGGCTTCTACAGCAATTTGTGGAATCATACACTCCATTTTTGGTGGACAACCTCTACTAGTTCTAGGAGTTGCAGAACCCACTATTCTTATGTACACATATTTGTACAATTATGCCAAAAATACCGAGGGCTTGGGACGAGAACTCTATTTGGCTTGGGTGGGATGGGTTTGTGTATGGAGTGCTTTACTGTTGTTTCTTTTAGCAATATTCAATGCTGGCAATATCATCAATAGATTTACAAGGATTGCTGGTGAGGTTTTTGGCATGTTGATTACAGTCTTATTCCTTCAAGAGGCTATCAAGGGAATGGTAACTGAGTTTCAAGTTCCGAAAGAAGGGAATCCAACATTGGATAAGTTCCAATTTCATTGGTTGTATGCAAATGGATTGCTTGGTGTTATATTCACTTTTGGCCTTCTCTATACTTCTTTAAAAAGTAGAAGAGCAAGGTCGTGGTTATACGGAACAGAAATGTTAAGAGGTTTCATCGCAGACTACGGAGTTCCTTTCATGGTAGTGGTGTGGACAGCATTATCATTTACAGTAGTATCGAGTAAAGTACCTTCTGGTGTTCCAAGAAGACTCGTTGCACCTTTGGCTTGGGATTCTGCGTCGTTACATCACTGGACAGTAATCAAAGATATGGGCAAGGTTTCTCCAACACACATTTTTCAAGCTTTTATTCCTGCCATAATGATAGCAGGGCTTTACTTCTTTGACCATAGTGTTGCATCCCAATTGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTCATGACTTTGCTTTGTGGACTAATTGGCTTGCCTCCTTCAAATGGAGTTCTGCCTCAATCCCCTATGCATACGAAGAGTCTGTCTGTTCTCAAGAAACAGTTGATCCGAAGAAAAATGGTTAAAAGTGCCAAGGAAAGCATAAGGCAGGAAGCTAGCAACTCTGAAATATATGGAAAGATGCAAGCAGTGTTTATAGAAATGGATAATAATCCTAATAAACAGTCAGTGGTAAAAGAACTAGAGGACTTGAAAGAGTTTGTCCTAAATGGCAAAGATAAAGGAGAGAACAATAAGAGCACATTTGATCCTGAGAAACACATTGATACATATTTGCCTGTAAGAGTAAAGGAGCAAAGAGTGAGCAACCTTTTACAGTCACTCTTTGTAGGAGCAGCAGTGTTTGCTATTCCTGCCATAAAAATGATACCAACTTCAGTTTTGTGGGGATACTTTGCGTACATGGCTATCGATAGTCTTCCAGGAAATCAATTTTGGGAAAGGATACTACTTATTTTTGTAAGACCTAGTAGGTGGTACAAGTTATTGGAAGGTGATCATGCTTCCTTTGTTGAGTCAGTACCTTTCAAAAATATAGTCTTGTTTACACTCATCCAATGTTTGTATTTCATAATTTGTTTTGGAGTTACATGGATTCCAATTGCTGGAATGTTGTTCCCTTTGCCATTTTTTTTGTTGATCGTATTGAGACAACATATACTCCCCAAGTTCTTCAGTCCAAAGCATCTTATAGAACTAGATGCAGCTGAATATGAAGAAATTCCTGGTGCTCCAAAACTGAGTCTCAGTTTATCCTTAAAGGAGGTTGAATCACCTAAAGTTGAATCAACAGACATAGATAGTGCTGAAATATTAGACGAGTTAACCACTAACAGAGGGGAGTTGAAGGTCAAAACAACTAGCTTTATCGAGGAAAGAAATCAACAGGTTCATCCTCATTAA 1986 0.3897 MESMRTPFRGIVSDFRGRALHYKDDWVSGFTSGTGILAPTTYIFFASALPVIAFGAQLSRDTDGSLSVVETLASTAICGIIHSIFGGQPLLVLGVAEPTILMYTYLYNYAKNTEGLGRELYLAWVGWVCVWSALLLFLLAIFNAGNIINRFTRIAGEVFGMLITVLFLQEAIKGMVTEFQVPKEGNPTLDKFQFHWLYANGLLGVIFTFGLLYTSLKSRRARSWLYGTEMLRGFIADYGVPFMVVVWTALSFTVVSSKVPSGVPRRLVAPLAWDSASLHHWTVIKDMGKVSPTHIFQAFIPAIMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLSVLKKQLIRRKMVKSAKESIRQEASNSEIYGKMQAVFIEMDNNPNKQSVVKELEDLKEFVLNGKDKGENNKSTFDPEKHIDTYLPVRVKEQRVSNLLQSLFVGAAVFAIPAIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLIFVRPSRWYKLLEGDHASFVESVPFKNIVLFTLIQCLYFIICFGVTWIPIAGMLFPLPFFLLIVLRQHILPKFFSPKHLIELDAAEYEEIPGAPKLSLSLSLKEVESPKVESTDIDSAEILDELTTNRGELKVKTTSFIEERNQQVHPH* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6920 661 Pfam HCO3- transporter family 200 375 IPR011531 GO:0006820|GO:0016021
Psa5g6920 661 Pfam HCO3- transporter family 455 546 IPR011531 GO:0006820|GO:0016021
Psa5g6920 661 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Psa5g6920 661 PANTHER BORON TRANSPORTER 4-RELATED 1 660 - -
Psa5g6920 661 PANTHER ANION EXCHANGE PROTEIN 1 660 IPR003020 GO:0005452|GO:0006820|GO:0016020
Psa5g6920 661 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6920 Psa-Chr5 569203692 569208010 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6920 1 660 Antiporters AT1G74810 68.468 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6920 K24194 - gmx:100811184 1105.89