Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6890 ATGAGGAAGAGTGGCATTTTGAAAGCTGGAGAAGTTCCAAGTCGATTGACTCGTGCTCGAGCGGCTGCTTTAAGTGCCACTGGACAGTTGCCACCATTGAAGAAGGTAGCAGAAGAAAGTCAGAAGAATCCTCTAAGAGCCAATTCAAAAAGAGCAGTTTCCGATGATACGTATCTTCCGCATAAGAAGAGGGCAATTCTTCACGATGTCACTAACATTCGCTGTGAGAAAACTTATCGGAGCGGTTTAAATCCAACTGAAAATCAGGCTAAGAAAAGAAAGCTGACTAAACCCGCTCAACCCGATGACTCAAAACCGGTGAAATTATCAGAAATGCGGCTTAGATCATCAGAAGATGTCATGTGTTCTGTTAAGTTGGAAGACAATGAACCAATTAGGCTGACTGCCAATCATTGTGGTACAAATAACAATCTGCTTCACAGTCAGACGTCTCGAGTAGATTCTCAGCTTTCGGTTTCTGAAAAGAAAGCTTCACAAACTGTTGCAGACAAAGGTAACATTTCTGAACTTTTGGATGTGTCAAAGCATCCGGATGTTGCTGACATAGATGCTGATTTTGAAGATCCTCAACTTTGCAGCCTCTATGCTGCTGATATATACGATCACATGCGTGTTGCTGAGCTGTCGAGAAGGCCTAATCCTAACTTAATGGAAACAGTACAGCGAGATATCACTCCAAGCATGCGTGGGATACTTGTTGATTGGCTTGTAGAGGTTTCCGAGGGATACAAATTGCAAGCAAACACTCTTTACCTTGCTGTATATGTCATGGATTGGTTTCTCTCAAAAAGTTTCATCGAAAGACATAAACTTCAGTTGCTCGGCATCACTTGCATGCTAATAGCCTCAAAGTACGAAGAAATTAACGCCCCCCATGTTGAAGACTTCTGCTTCATCACAGACAACACATACACAAAAGAGCAGGTACTACAGATGGAGTCTCTAGTGTTGAAGTCCCTTGCATATCAACTATTTGCTCCTACTACAAAAACTTTTCTCAGGAGATTTCTTCGAGCGGCACAAGCTTGTTACAAGAGACCAAGCATTGAGTTGGAGTACTTGGCGAATTACCTGGCAGAACTAACATTGATGAGCTATGGTTTCTTAAATTTCCTTCCTTCAATGATTGCTGCATCTGCCGTGTTTCTCGCACGATGGACATTAGATCAGTCAAACCACCCATGGAATCCAACTCTCGAACACTATGCTTCTTACGAAGCATCGGATTTGAAAGACGCGGTTCTTGCATTACAAGATCTACAACTGAATAGCAATGACTGTCCTTTAACCTCAATCCGCACCAAGTACACACAAGACAAGCTCAAATGTGTAGCAACTTTGTCTTCGCCGAAATTGCTTGAAACAATGTTTTCAAGATGA 1401 0.4233 MRKSGILKAGEVPSRLTRARAAALSATGQLPPLKKVAEESQKNPLRANSKRAVSDDTYLPHKKRAILHDVTNIRCEKTYRSGLNPTENQAKKRKLTKPAQPDDSKPVKLSEMRLRSSEDVMCSVKLEDNEPIRLTANHCGTNNNLLHSQTSRVDSQLSVSEKKASQTVADKGNISELLDVSKHPDVADIDADFEDPQLCSLYAADIYDHMRVAELSRRPNPNLMETVQRDITPSMRGILVDWLVEVSEGYKLQANTLYLAVYVMDWFLSKSFIERHKLQLLGITCMLIASKYEEINAPHVEDFCFITDNTYTKEQVLQMESLVLKSLAYQLFAPTTKTFLRRFLRAAQACYKRPSIELEYLANYLAELTLMSYGFLNFLPSMIAASAVFLARWTLDQSNHPWNPTLEHYASYEASDLKDAVLALQDLQLNSNDCPLTSIRTKYTQDKLKCVATLSSPKLLETMFSR* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6890 466 CDD CYCLIN 334 424 IPR013763 -
Psa5g6890 466 MobiDBLite consensus disorder prediction 90 107 - -
Psa5g6890 466 CDD CYCLIN 235 324 IPR013763 -
Psa5g6890 466 Pfam Cyclin, C-terminal domain 334 456 IPR004367 -
Psa5g6890 466 Gene3D - 219 332 - -
Psa5g6890 466 SUPERFAMILY Cyclin-like 194 331 IPR036915 -
Psa5g6890 466 Gene3D - 205 453 - -
Psa5g6890 466 PANTHER CYCLINS 44 464 IPR039361 -
Psa5g6890 466 Pfam Cyclin, N-terminal domain 205 331 IPR006671 -
Psa5g6890 466 SUPERFAMILY Cyclin-like 334 459 IPR036915 -
Psa5g6890 466 SMART cyclin_7 338 426 IPR013763 -
Psa5g6890 466 SMART cyclin_7 241 325 IPR013763 -
Psa5g6890 466 MobiDBLite consensus disorder prediction 80 107 - -
Psa5g6890 466 PIRSF Cyclin_A_B_D_E 11 465 IPR039361 -
Psa5g6890 466 PANTHER CYCLIN-A2-4 44 464 - -
Psa5g6890 466 MobiDBLite consensus disorder prediction 33 54 - -
Psa5g6890 466 SMART Cyclin_C_2 334 457 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6890 Psa-Chr5 566846355 566850127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6890 1 464 Core Cell Cycle Gene Families AT1G80370 49.682 5.08e-152 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6890 K06627 - gmx:100793657 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6890 5 566846355 566850127 Psa5g6890 5 566846355 566850127 ECH