Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6874 ATGCCTAAGAAGCTTCAAAAAACCCTTCAAGATTACCTCAACAAACTCAAAAACAAAAACCCTCACCCTCAAATTAAGTTAACCAAAATGCTCTCTGGCTGCAAACACCCTAAAACGCCGTCGTTTTCACTAGAAAACGGCAGAAACTTATCATCCAACGCCGTTAACAACAACACCAACAAAATCGACGACGCAGCAACTCTAGCTGACGTCGACCGTTTTCTCTTTGAGAATTTCAAGTCTCTCTATTTCAAGGACGAAGACGAAACGGAAAACACCGTCAAAACAATCTCCGGCGGAAAAAACAACCATGAACCATCGAAAACCACTTCCTTCATGCTCGAATCACCGCGATTCGATGCATCACCACCACCGGATCTTTCCCGATCAGCACGATTCTTCGTGAAAGCGGAAAACTCAAGATCCTTGATGGAAGATGCTCTATCGCTAACAAACAGCGATGATGGTGATTCGAGTAATTCGAACTCATCCTCAACAGAATCGCCTTCGAAAGAGGTAGTTGTAGTTCATGAAGATCATAACCAAACTCTTCCTGAAAAGTGCATTGCTCTGTTATCGTATTCGCCTAATCCTTACGATGAATTCCGGCGATCGATGCAAGAATTGGTGGAATCGAAGTACGGTAAAACCGAAATCACTGAAATGAAAATTGATTGGGATTTCATGGAGGAGATTTTGTTCTGTTACCTGAATCTGAATGAGAAAAAGTCTCATAAGTTTATTCTGAGTGCTTTTGTTGATCTCATCACTGTTATGCGTCAGAATTCGGAAGCAGCTCCGGCGAAGCCGTGTAGCGTGAGAACCGTTAGGATTGGTAGAGAAGTGAGGAAGAAGAAGACTAAGCAAGTAACCATTGAATTTGGGTCTTAG 891 0.4265 MPKKLQKTLQDYLNKLKNKNPHPQIKLTKMLSGCKHPKTPSFSLENGRNLSSNAVNNNTNKIDDAATLADVDRFLFENFKSLYFKDEDETENTVKTISGGKNNHEPSKTTSFMLESPRFDASPPPDLSRSARFFVKAENSRSLMEDALSLTNSDDGDSSNSNSSSTESPSKEVVVVHEDHNQTLPEKCIALLSYSPNPYDEFRRSMQELVESKYGKTEITEMKIDWDFMEEILFCYLNLNEKKSHKFILSAFVDLITVMRQNSEAAPAKPCSVRTVRIGREVRKKKTKQVTIEFGS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6874 296 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 189 258 IPR006458 -
Psa5g6874 296 MobiDBLite consensus disorder prediction 150 171 - -
Psa5g6874 296 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 274 - -
Psa5g6874 296 Pfam Transcriptional repressor, ovate 195 257 IPR006458 -
Psa5g6874 296 ProSiteProfiles OVATE domain profile. 191 258 IPR006458 -
Psa5g6874 296 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 274 IPR038933 GO:0045892
Psa5g6874 296 MobiDBLite consensus disorder prediction 150 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6874 Psa-Chr5 566109381 566111869 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa5g6874 Ovate 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6874 - - lja:Lj3g3v0160750.1 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6874 5 566109381 566111869 Psa5g6874 5 566109381 566111869 ECH
Psa5g6874 5 566109381 566111869 Psa7g5781 7 482905215 482907455 PCT