Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6831 ATGTCATCCTTTCTACGCATTTTCTTTTTCATTTTCTTGGCTACTGCTACTTCTGTTCAATCTGCGAGACAATTTCATGTTGGTGATCATTTAGGTTGGCGCCAGCCTGATCAAAACAATGCTGATTTTTACACCAAATGGGCTCAAACTAACCGATTCCAAATCGGAGATTCTCTCGTTTTTGAGTACGAGAATGACTCAGTTCTTAGTGTTGAAAAAGAGGATTACTTTAACTGTGACACAAGTAAACCAATCACTACTTTTACCAATGGAAAGAGCACTCTTAATCTTGACAGATCTGGACCTTTCTACTTTATCAGTGGAACTGATGATCATTGCAACAATGGCCAAAAACTGCTTGTTGAAGTTATGGCGCCGCATACAATTCCAGCATCTCCTCCCACTCCGACCACCATTGCGGTTCCGCCTGAAGGCTCCTCGTCACCGATGATGGCTCCTTCCAATGCGCCTTATTCGTCTGATACCTTGGATCAGGCCACATCGTCTTCTTCCATGGTGGTGGTTGCTTCATGTTTTATGTCTACTTTGGTCACATTTGTAATTGTGATAATGTTAGGACTTTGA 585 0.4222 MSSFLRIFFFIFLATATSVQSARQFHVGDHLGWRQPDQNNADFYTKWAQTNRFQIGDSLVFEYENDSVLSVEKEDYFNCDTSKPITTFTNGKSTLNLDRSGPFYFISGTDDHCNNGQKLLVEVMAPHTIPASPPTPTTIAVPPEGSSSPMMAPSNAPYSSDTLDQATSSSSMVVVASCFMSTLVTFVIVIMLGL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6831 194 Gene3D - 22 132 IPR008972 -
Psa5g6831 194 SUPERFAMILY Cupredoxins 22 124 IPR008972 -
Psa5g6831 194 CDD OsENODL1_like 23 124 IPR041846 -
Psa5g6831 194 Pfam Plastocyanin-like domain 38 117 IPR003245 GO:0009055
Psa5g6831 194 PANTHER EARLY NODULIN-LIKE PROTEIN 2 7 187 - -
Psa5g6831 194 PANTHER BLUE COPPER PROTEIN 7 187 IPR039391 GO:0009055
Psa5g6831 194 ProSiteProfiles Phytocyanin domain profile. 23 125 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6831 Psa-Chr5 564167937 564168851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6831 12 127 Phytocyanin Superfamily AT1G79800 50.862 1.67e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6831 - - aip:107614831 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6831 5 564167937 564168851 Psa5g6831 5 564167937 564168851 ECH