Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6774 ATGTGTAACAAGTTTTCAAGTTCAGATATGGCAGGACACTTCGTACTTTTATTGTTTCGACTCTCTTTGATTTTACCTTTCATTGTTCATGCTCAGGACAACCAATCAGGATTCGTTAGTATTGACTGTGGACTAGTGGATGAACCAAGCTACAGAGATGAAACTACTTCCATCTATTACACTTGGGATGTTAATTTCACAGATACTGGTGTAAGCCGCAGCATATCGTCTAAACACAAGGCTTCCCTTGAAAGACAGTTCTGGAATGTTAGAAGCTTCCCAGAAGGAACCAGGAATTGCTACACCCTTTTTGTTTCACAAGGAAGTAGCAAGAAATACTTAGTCAGGGCCAGTTTTGCGTATGGTAATTATGATGGAAAAGTCTCTCTTCCTGAATTTGATATTTACCTTGGAGCCAAACGGTGGGAATCCGTGGTGTTCGAGGATTCATTGAGTGTAATAACTAAGGAAATAATTTATGCTGCTTCCTCGGATTATGTTCATGTTTGTTTGTTCAATACTGGAAAGGGTACACCTTTTATTTCAGTTTTAGAGGTTAGAGTTCTTAACAGTGATGCTTATCTTGTTAACTCTTTGGAGCTTTTGGCAAGATTTGATGTAGGCTCACAGGGTGGTTCAAAAATCAGATATCCAGATGATATTTATGACAGAATATGGACACCATATAACTCAATTGACTGGAAAAAGATACATACTTCGCTCACCGTACACCCACCTTCGTTCAATTTCTTACCGCTACCACCCTCCGCTGTCATGAGAACAACATCAGTTCCAGAAAATGACAGCGACAATGTAGAGTTTTACTTCCTTCCCAAGTATAATGCTTCCAGATATTACGTGTATTTGTACTTCGCTGAAATCCAGAAACTCAAGGAAAATCAAATTAGAGAGTTCAACATTTTTGTAAATGGGAAGCTTTTAAATAATGATCCAGTCAACCCTTTGTACCTGCAGAGCATGTATTATGTATCAGTTATAAGTGAAAATAAGTTGGAACTTTGGTTTAATAAGACTAGTAGATCAACTCTTCCACCACTCTTTAATGCGATCGAGATATACATGACAAAGGACTTCTTACAATCAGAAACATATCAAACAGACGTTGATGCTATCCTCAATGTGAAGTCAATTTATGATATCAAGAGAAACTGGAAGGGAGATCCTTGTGCTCCTGTGTCTTTTTTGTGGGATGGTCTAAACTGCAGCTATGTTGGATCTAATTCACCAAGGATCATATACTTGAACTTAACTTCTAGCGGCTTAATTGGAACTATAGCTCCTGCCATATCCAATCTAAAGTCAATAGAATATTTGGACTTGTCAAATAACAGCTTGACTGGGGCTGTGCCTGATTTCCTATCTCAGCTGCGCTTCTTGCGAGTTTTAAATCTGGAAGGAAATAAGCTATCAGGAGCAATTCCAGTAGAACTTCTTGTGCATCCAAAGAATAGTGTGCTCAAATTCAATTTTGGTGGAAATCCAAATCTTTGCTCCTCAGGTTCATGCAACAAGAGGAATGGAAATAATGTTGTGGTTCCATTAGTAGCATCACTCGGAGGTGCTTTCGTGATACTAGCAGTAGCAATGATTTGTTTTCGCATATACTACAAGAGACACCAAACTTCCCATTTGCTGAGCAAGGTGGGTGCTTATTCAAGAATAAAGCGGGAACTAGAGTCAAAGAAACAAGAGTTCACCTATGAAGAAGTATTAAACATTACCAGAAACTTTGAAAAGGTTGTCGGAAAAGGAGCATCTGGAACAGTCTACCATGGCTGGATTGATGATGATACTGAGGTAGCTGTCAAAATGCTATCTTCCTCATCAGCTCAAGCATATCTGCAATTTCAAGCAGAGGCCAAACTTTCTGCTATAGTTCATCATAAATACTTGACTGGTCTTATAGGGTATTGTGATGATGGCACCAACGTGGCTCTAATCTATGAGTACATGGCTAATGGAGACTTAGCCAACCACTTGTCAGATAAAACCGAAAATATATTGAGTTGGAATCAGCGACTTCAAATTGCAGTAGATGCTGCAGAAGGATTGGAGTATCTGCATCATGGCTGCAATCCACCAATTGTTCACAGAGATGTTAAATCTAAAAACATCTTGCTTAATGAAAAACTCCAGGGTAAATTAGCTGATTTCGGGTTGTCGAAGATTTTTCCTAATGAAGGTGACACTCATGTCTTCACGGTTGTTGCTGGCACGCCAGGATACCTTGATCCAGAGTACAATAGACTAAACAAGCTGAGAGAAAAAAGTGATGTTTTCAGTTTCGGGGTAGTTTTGCTTGAGATAATTACAGGACAACCTGCCATAACCAAAACTGAAGAGAAAATCCATATTATTCAATGGGTTGGTTCATTGCTGGTGGAAAGAGAGGTAAAGGATATTGTAGATTCTAGATTACAAGGAGAATTTGATATTTCCTCTGCAAAGAAAGTTTTGGATATTGCAATGGCTTGTGTTGCACCAACTTCTATCAATAGGCCAATGATGAAGCATGTAGTTATGGAACTGAAACAATGTTTGGAAAACAAGATTACTCGTCCGTGTGATTCAAATTATACTCATGAGAATGAGACCTTATCCAGCACCTTAAATTCTGTTTCCTTTGATAGAATTAGTGGTGAGAGCTCTCTAGCGAGGTAA 2682 0.3881 MCNKFSSSDMAGHFVLLLFRLSLILPFIVHAQDNQSGFVSIDCGLVDEPSYRDETTSIYYTWDVNFTDTGVSRSISSKHKASLERQFWNVRSFPEGTRNCYTLFVSQGSSKKYLVRASFAYGNYDGKVSLPEFDIYLGAKRWESVVFEDSLSVITKEIIYAASSDYVHVCLFNTGKGTPFISVLEVRVLNSDAYLVNSLELLARFDVGSQGGSKIRYPDDIYDRIWTPYNSIDWKKIHTSLTVHPPSFNFLPLPPSAVMRTTSVPENDSDNVEFYFLPKYNASRYYVYLYFAEIQKLKENQIREFNIFVNGKLLNNDPVNPLYLQSMYYVSVISENKLELWFNKTSRSTLPPLFNAIEIYMTKDFLQSETYQTDVDAILNVKSIYDIKRNWKGDPCAPVSFLWDGLNCSYVGSNSPRIIYLNLTSSGLIGTIAPAISNLKSIEYLDLSNNSLTGAVPDFLSQLRFLRVLNLEGNKLSGAIPVELLVHPKNSVLKFNFGGNPNLCSSGSCNKRNGNNVVVPLVASLGGAFVILAVAMICFRIYYKRHQTSHLLSKVGAYSRIKRELESKKQEFTYEEVLNITRNFEKVVGKGASGTVYHGWIDDDTEVAVKMLSSSSAQAYLQFQAEAKLSAIVHHKYLTGLIGYCDDGTNVALIYEYMANGDLANHLSDKTENILSWNQRLQIAVDAAEGLEYLHHGCNPPIVHRDVKSKNILLNEKLQGKLADFGLSKIFPNEGDTHVFTVVAGTPGYLDPEYNRLNKLREKSDVFSFGVVLLEIITGQPAITKTEEKIHIIQWVGSLLVEREVKDIVDSRLQGEFDISSAKKVLDIAMACVAPTSINRPMMKHVVMELKQCLENKITRPCDSNYTHENETLSSTLNSVSFDRISGESSLAR* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6774 893 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 893 - -
Psa5g6774 893 Gene3D Ribonuclease Inhibitor 375 495 IPR032675 -
Psa5g6774 893 SUPERFAMILY Protein kinase-like (PK-like) 567 850 IPR011009 -
Psa5g6774 893 SUPERFAMILY L domain-like 377 488 - -
Psa5g6774 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 702 714 IPR008271 GO:0004672|GO:0006468
Psa5g6774 893 Pfam Protein tyrosine and serine/threonine kinase 584 850 IPR001245 GO:0004672|GO:0006468
Psa5g6774 893 ProSiteProfiles Protein kinase domain profile. 582 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6774 893 Pfam Malectin-like domain 41 361 IPR024788 -
Psa5g6774 893 Gene3D Phosphorylase Kinase; domain 1 564 657 - -
Psa5g6774 893 Pfam Leucine rich repeat 420 476 IPR001611 GO:0005515
Psa5g6774 893 ProSitePatterns Protein kinases ATP-binding region signature. 588 610 IPR017441 GO:0005524
Psa5g6774 893 PANTHER OS07G0107800 PROTEIN-RELATED 13 893 - -
Psa5g6774 893 Gene3D - 199 363 - -
Psa5g6774 893 SMART serkin_6 582 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6774 893 Gene3D Transferase(Phosphotransferase) domain 1 658 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6774 Psa-Chr5 561655425 561659934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6774 24 854 Receptor kinase-like Gene Family AT2G19210 49.171 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Psa5g6774 Malectin_like 3.6e-100 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6774 - - gmx:100778537 1302.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6774 5 561655425 561659934 Psa5g6774 5 561655425 561659934 ECH