Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6766 ATGAATCGAGAACAGAAGCGAGGGAAGGTTGAAAAAGGTTGTGAGGGTGCTGAGAAGGTTATTGTCGCGGTTAAGGCGTCGAAGGAAATTCCGAAGACTGCGCTTGTTTGGTCTTTGACTCATGTTGTTCAGCCTGGTGATTGCATTACACTGTTAGTGGTCGTGCCTTCGCAGAGTTCAGGCCGGAAACTATGGGGCTTTCCGCGGTTTGCTGGTGACTGTGCGAATGGACACAAGAAGTCAGCAACTGCGGGAGCTAGTTCGGAGAACAAGAATGATATCACTGATTCTTGCTCTCAAATGATTCTTCAGCTTCATGATGTCTATGATCCTAATAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCACCTTGTGGAGCTGTGGCTGCGGAAGCTAAGAAAGTACAAGCCAAATGGGTTGTATTAGACAAACATCTCAAGCACGAAGAAAAACAATGCATGGAAGAGCTGCAATGTAACATCGCGGTTATGAAGGGTTCTCAACCTAAGACACTTCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCTTGAAGAAACATGTCAATTACCTTCTGAGCAGCATGAGATGCCTGGAAAACAATCCAACAAGAAGAATGGTTCTTCGAACTCCACGTTAGGAATTCTGACGCCAACTAGCAGCCCTGAGCTAGAGACATCGTTTACTGCTACAGAAGCTGGCACTTCATCGGTTTCAAGCTCTGATCATGGAACTTCGCCGTTTTGTGTCTCCGAGATCATTGCCAAGTCAAAGAAAGAGGAGACTATCAAAGAAAATCAAGAAACTGATGAGACTATTTCTGACACGGACAGTGAAAGTTTGTGCACATCTTCCGCAAGCTTGAGATTTCAGCCGTGGATGTCGGATTTATTTTTACGTAAACAGTCATCTCAACGTGAAGAGAAACGGTCAGAGAGTTCGCGTAATTTGCTTCAAACTTCCACCACAACAAGAGCTTTGCTAGAAAAGTTCTCGAGGCTTGACAGAGAAGCCGAAATGGAAATCTCAACCTCTATGTCATACTTGGAATTCAGTGGAAGCGTTAGAGAAGCAGTAGCGTTATCTAGAAACGCCGCACCTGGCCCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCTGTGTTTGGAAAACCTCCAAGATGGTTCAGCTACGCAGAGTTGGAGCTAGCCACTGATGGATTTTCGCCGACTAATTTCTTGGCAGAAGGAGGGTTTGGATCTGTTCATAGGGGAGTTCTACCCGAAGGGCAAGTCATTGCTGTCAAGCAACATAAGTTGGCTAGCTCTCAGGGTGATCTTGAGTTCTGCTCAGAGGTAGAAGTCCTGAGTTGTGCACAGCATCGGAATGTTGTTATGTTGATTGGGTTCTGTATAGAGGATAAGAGAAGACTTCTGGTTTATGAATACATATGCAACGGATCATTGGATACTCATTTATACGGGAGACAGCAGAAACCGTTGGAATGGTCTGCGCGGCAGAAAATTGCAGTTGGAGCTGCCCGAGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGGGATGCATTGTTCACCGTGACATGCGGCCTAACAACATTCTTATCACTCACGATTTTGAACCGCTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACCGGAGTGGAAACTCGAGTTATTGGGACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGACAAATAACTGAAAAGGCTGATGTTTATTCCTTTGGAGTGGTATTAGTGGAGCTTGTGACCGGGCGTAAAGCGGTCGATATCAACCGGCCCAAAGGACAGCAGTGTCTTACAGAGTGGGCGCGACCACTGCTAGAAGAGTATGCCATTGAAGAACTAATTGATCCAAGGTTGGGAAGTCGCTATTCAGAACACGAAGTCTCTTGCATGCTACATGCAGCATCATTATGCATAAGGCGAGATCCTTATTCGAGACCACGCATGTCACAGGTTTTGCGAATACTAGAGGGCGACACGGTCATGGAATCACCACGCCAATTCGGCGGTTCCCCTTCCCTATGA 2076 0.4591 MNREQKRGKVEKGCEGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRKLWGFPRFAGDCANGHKKSATAGASSENKNDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKVQAKWVVLDKHLKHEEKQCMEELQCNIAVMKGSQPKTLRLNLVGSQKKDLEETCQLPSEQHEMPGKQSNKKNGSSNSTLGILTPTSSPELETSFTATEAGTSSVSSSDHGTSPFCVSEIIAKSKKEETIKENQETDETISDTDSESLCTSSASLRFQPWMSDLFLRKQSSQREEKRSESSRNLLQTSTTTRALLEKFSRLDREAEMEISTSMSYLEFSGSVREAVALSRNAAPGPPPLCSICQHKAPVFGKPPRWFSYAELELATDGFSPTNFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDTHLYGRQQKPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDINRPKGQQCLTEWARPLLEEYAIEELIDPRLGSRYSEHEVSCMLHAASLCIRRDPYSRPRMSQVLRILEGDTVMESPRQFGGSPSL* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6766 691 Gene3D Transferase(Phosphotransferase) domain 1 479 685 - -
Psa5g6766 691 MobiDBLite consensus disorder prediction 192 211 - -
Psa5g6766 691 SUPERFAMILY Protein kinase-like (PK-like) 387 675 IPR011009 -
Psa5g6766 691 Pfam Protein tyrosine and serine/threonine kinase 408 672 IPR001245 GO:0004672|GO:0006468
Psa5g6766 691 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 681 - -
Psa5g6766 691 MobiDBLite consensus disorder prediction 218 245 - -
Psa5g6766 691 PANTHER OS01G0253100 PROTEIN 15 681 IPR045271 GO:0004714|GO:0006468
Psa5g6766 691 Gene3D HUPs 5 157 IPR014729 -
Psa5g6766 691 MobiDBLite consensus disorder prediction 261 280 - -
Psa5g6766 691 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Psa5g6766 691 CDD STKc_IRAK 409 675 - -
Psa5g6766 691 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Psa5g6766 691 MobiDBLite consensus disorder prediction 195 211 - -
Psa5g6766 691 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6766 Psa-Chr5 561016574 561020769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6766 378 669 Trihelix Transcription Factor Family AT1G68690 52.862 1.17e-98 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Psa5g6766 PK_Tyr_Ser-Thr 5.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6766 - - gmx:100789216 1147.5