Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6742 ATGGACAAAAGGCCTGACCTCATCCATGGAACAATTGAAGCTACCATCTTCAATGCAACTCCTTACTCTCCTTCATTTCCCTTCAATTGTTTATGCATAAATGGAAAACCTGCTTATGTGACAATCAAGATAGACAACAAGAAAGTAGCAAAAACAACACAAGAAAGCGAACGTATTTGGAACCAAACATTTCAGGTTCATTGCGCTCACCTAGCTGATTCAACTATCACCATTACACTGAAAACATCATGTTCCATATTAGGAAAATTCCACATCAAGGCACAACAGTTGAAGCAAGAGAGTTTGATTGATGGATTCTTCCCTCTCCTCATGGAAAATGGTAAACCAAATGAAGAACTAAAACTAAGGTTTATATTATGGTTCAAGCCAGCAAATTTGGAACCAAGTTGGTCAAAGCTATTAAGTAGTGAAGAGTTTCAAGGGCTAAGGGATGCTACATTTCCACAAAGATCTAATTGTCATGTTAAGCTCTATCATGATGCTCATCATTCACCTACTTTCCAACCTCCTTTAGATATTTGTGGAGTTCCAAGATTGCTATGGGAAGATGTTTATAAAGCTATTGAGGGTGCAAAGTATTTAGTTTACATTGCAGGATGGTCTTTCAATCCAAAGATGGTTCTGGTTAGAGATCCTCAAACAGAAATCCCACATGCAAGAGAAATAAAGTTAGGTGAACTGTTGAAGAAGAAAGCAGAAGAAGGTGTTTCTGTAAGGATTATGATTTGGGATGATGAGACATCATTGCCACTTATTAAGAACAAAGGTGTGATGAACACACATGATGAGGATGCATTTTCTTACTTTAAACATACAAAAGTAGTATGCAGAAAGTGTCCTAGATTACATCATAAATTCCCAACAATTTTTGCTCATCATCAGAAAACCATAACCATGGATACCAAAGCTCCTAACTCTGTCAATGACAGAGAAATTATGAGTTTTTTGGGCGGTTTAGATTTGTGCGACGGACGGTATGATACCGAGAAACATTCGTTGTTTCAAACACTTACTAAGGAATCACATTACCATGATTTCTACCAGACAAGCATTGTAGGAGCAAGCCTCAAGAAAGGAGGTCCAAGAGAGCCTTGGCATGATGCCCATGCTTGTGTTACTGGCGAGGCGGCTTGGGATGTTTTAACCAATTTTGAACAAAGATGGACCAAACAATGTGATTCATCGCTTCTAGTCCCTGCAAACACCTTACAAAAATTCATTCCTATTTCCTCAACAAGCACTTCCATTGAGAGGAATTGGAAAGTACAAGTATATCGGTCGATTGACCATGTCTCAGCTAGCCAACTGTTTCGAAAACTAACAGTTGAGACTAGCATCCATGAAGCTTACGTCGAAGCAATTAGGCGCGCCGACAGGTTTGTGTACATTGAAAACCAATATTTCATTGGAGGGTGTCATTTGTGGCGGAAAGATAGAAACAGTGGCTGCAGAAATTTGATACCTATTGAGATTGCACTCAAGATAGTCAACAAGATAAAAGCAAGAGAAAGATTTGCAGTGTATATAGTCATACCAATGTGGCCAGAAGGAGGACCTGAGAGTGAACCAGTTCAAGATATACTACATTGGACAAGAGAAACAATGACAATGATGTATAAGTTGATTGGAGAAGCAATTATAGAAAGTGGTGAGCCAGGACATCCAAGAGATTATTTGAATTTCTTTTGCCTTGCAAATAGGGAAAACAAGGAAAATGAAGAATATATTCCTCCACATTCCCCTCATCCTGAAACTGAATATTGGAATGCACAGAACAATAGAAGATTCATGGTTTATGTTCACTCCAAACTCATGATAGTGGACGACCTATATATATTAATAGGATCGGCAAATGTGAACCAGAGATCGATGGACGGGCAAAGAGACACAGAGATTGCGATCGGAGGCTATCAATCTCAGGAAGGAATTGATCACCACATGACCAAAGGTGATATTCATGCATACAGAATGTCAATGTGGTACGAGCACACAGGGAGAGCTGAGAACTTGTTTTTAGAGCCAGAAAGTTTAGAATGTGTGCAGAGAATGTGTTCAATAGGAGATAAAATGTGGAAAATCTATAGTAGTGAAGAAATTGTGGACATGGAAGGTGTACATCTAGTAACTTACCCTATGGAAGTAACAAAAGATGGATCTGTGGAGGACTTAACTAACGGTGAGGAACATTTTCCTGATACAACATCTCTAGTGAAAGGGAGAAGATCAAAGTTATTACCCTCTGTCATTACTACTTAG 2277 0.3891 MDKRPDLIHGTIEATIFNATPYSPSFPFNCLCINGKPAYVTIKIDNKKVAKTTQESERIWNQTFQVHCAHLADSTITITLKTSCSILGKFHIKAQQLKQESLIDGFFPLLMENGKPNEELKLRFILWFKPANLEPSWSKLLSSEEFQGLRDATFPQRSNCHVKLYHDAHHSPTFQPPLDICGVPRLLWEDVYKAIEGAKYLVYIAGWSFNPKMVLVRDPQTEIPHAREIKLGELLKKKAEEGVSVRIMIWDDETSLPLIKNKGVMNTHDEDAFSYFKHTKVVCRKCPRLHHKFPTIFAHHQKTITMDTKAPNSVNDREIMSFLGGLDLCDGRYDTEKHSLFQTLTKESHYHDFYQTSIVGASLKKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDSSLLVPANTLQKFIPISSTSTSIERNWKVQVYRSIDHVSASQLFRKLTVETSIHEAYVEAIRRADRFVYIENQYFIGGCHLWRKDRNSGCRNLIPIEIALKIVNKIKARERFAVYIVIPMWPEGGPESEPVQDILHWTRETMTMMYKLIGEAIIESGEPGHPRDYLNFFCLANRENKENEEYIPPHSPHPETEYWNAQNNRRFMVYVHSKLMIVDDLYILIGSANVNQRSMDGQRDTEIAIGGYQSQEGIDHHMTKGDIHAYRMSMWYEHTGRAENLFLEPESLECVQRMCSIGDKMWKIYSSEEIVDMEGVHLVTYPMEVTKDGSVEDLTNGEEHFPDTTSLVKGRRSKLLPSVITT* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6742 758 PANTHER PHOSPHOLIPASE D 4 758 IPR015679 -
Psa5g6742 758 Gene3D Endonuclease Chain A 444 648 - -
Psa5g6742 758 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 603 630 IPR001736 GO:0003824
Psa5g6742 758 SUPERFAMILY Phospholipase D/nuclease 416 687 - -
Psa5g6742 758 Pfam Phospholipase D Active site motif 606 630 IPR001736 GO:0003824
Psa5g6742 758 SUPERFAMILY Phospholipase D/nuclease 147 406 - -
Psa5g6742 758 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 124 IPR035892 -
Psa5g6742 758 PIRSF PLD_plant 7 758 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Psa5g6742 758 Pfam C2 domain 38 109 IPR000008 -
Psa5g6742 758 Gene3D Endonuclease Chain A 184 422 - -
Psa5g6742 758 SMART pld_4 295 332 IPR001736 GO:0003824
Psa5g6742 758 SMART pld_4 603 630 IPR001736 GO:0003824
Psa5g6742 758 Pfam Phospholipase D C terminal 675 747 IPR024632 -
Psa5g6742 758 PANTHER PHOSPHOLIPASE D ALPHA 4 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6742 Psa-Chr5 559651474 559655597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6742 30 758 Phospholipase D Gene Family (Wang group) AT1G55180 62.584 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6742 K01115 - gmx:100807431 1338.17