Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6728 ATGGCAAGCAACATAGTAGAAAGGGTGCAATATCCATTAGACTCTTCCTCCTACAAGATCATCGACGAGATTGGCGCCGGTAACAGCGCTGTCGTCTACAAAGCAATCTGCATCCCCATAAACTCCATACCAGTTGCTATAAAATCCATAGACTTAGATCGTTCCCGCCCCGACCTCGACGATGTTCGACGTGAAGCGAAGACATTATCACTTCTTTCTCACCCCAACATCCTCAAAGCTCACTGTTCCTTCACGGTGGACCGCCGTCTTTGGGTGGTTATGCCATTTATGGCAGGAGGTTCATTGCAGTCCATAATCTCTCACTCTTTCCAAAACGGCTTAACCGAACAATCCATAGCAGTTATTCTCAAAGACACTCTCAATGCTCTTTCTTACCTCCATGGACAAGGTCACCTTCATAGAGATATCAAATCTGGTAACATCCTTGTTGACTCAAATGGATTAGTGAAACTTGCTGATTTTGGTGTTTCTGCTTCCATTTATGAATCAAACAACTCTGTAGGAGCATGTTCTTCTTATTCATCTTCATCTTCTAATTCTTCTTCTTCTCTTATGTTTACTGATTTTGCTGGAACACCTTATTGGATGGCTCCTGAGGTTATTCATTCTCATAATGGTTACAGTTTCAAAGCTGATATTTGGTCTTTTGGGATAACTGCTTTGGAGTTGGCACATGGAAGACCACCACTTTCTCATCTTCCTCCTTCTAAGTCAATGATGCTTAACATCACCAAGAGGTTTAGGTTTTCTGATTTTGATAAATATATTTACAAGGGTCATAGTGGTGGAAGTAATAAATTTTCTAAGGCTTTTAAGGATATGGTTGCTTCTTGTTTGAATCAAGATCCTGCAAAAAGACCTTCAGCTGAGAAGTTGCTTAAGCATTCATTCTTTAAAAACTGCAAGGGACCAGAGTTTTTGGTGAAGAATGTGTTGAATGGTTTGCCTAGTGTTGAGAAAAGGTATAAAGAGATCAAAGTTACAATGGGTGCAGATTCGAATGGTAATGATGATGATGGTGATGATGATGAGAACTCAGTGGTGAATGTGAAGCAGAGAAGAATTAGTGGATGGAATTTCAATGAAGATGGGTTGAAACTTGAGCCGGTATTCCCAAAGGACCCGTGCAGAGAAGATCATGATGTGGTGAAACAAGTTCGGTTTGAAGAAGAAAACGCGATCCAAGTGGAGGAAGATGTTGCATCATCAGGAACTGTGATTGACGCAAACCTCAATGCTTCTGATGAGGTTGATATTGATGATGTTAGTGGTGTTGTGAAGAACCGTGAAGCTACGTTGGCGACTCTGAGTGTGTTGAAAGGGAGCTTGGAACAAGAACTGGGACAGGTGAAGTTTCTGATGAGTCTAATTGGTGGAAATGGAGAGGAGAATCATGTGGCTGAGAGCGAGGAGAAAACGGTGAAGGAGATCTCTAAGTTGAGGATGGAGTTAGAAACTGAGAGGAAGAAGAATTTGCAGTTGGAGCTGCAGCTTGAGAATATCAAGCTTCACCTAATTTCATCTACTGCTAATAGTCCTACAAGTTAA 1569 0.4149 MASNIVERVQYPLDSSSYKIIDEIGAGNSAVVYKAICIPINSIPVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAGGSLQSIISHSFQNGLTEQSIAVILKDTLNALSYLHGQGHLHRDIKSGNILVDSNGLVKLADFGVSASIYESNNSVGACSSYSSSSSNSSSSLMFTDFAGTPYWMAPEVIHSHNGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLNITKRFRFSDFDKYIYKGHSGGSNKFSKAFKDMVASCLNQDPAKRPSAEKLLKHSFFKNCKGPEFLVKNVLNGLPSVEKRYKEIKVTMGADSNGNDDDGDDDENSVVNVKQRRISGWNFNEDGLKLEPVFPKDPCREDHDVVKQVRFEEENAIQVEEDVASSGTVIDANLNASDEVDIDDVSGVVKNREATLATLSVLKGSLEQELGQVKFLMSLIGGNGEENHVAESEEKTVKEISKLRMELETERKKNLQLELQLENIKLHLISSTANSPTS* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6728 522 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Psa5g6728 522 Gene3D Transferase(Phosphotransferase) domain 1 100 349 - -
Psa5g6728 522 Coils Coil 474 511 - -
Psa5g6728 522 SMART serkin_6 18 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6728 522 ProSiteProfiles Protein kinase domain profile. 18 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6728 522 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 7 518 - -
Psa5g6728 522 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 7 518 - -
Psa5g6728 522 SUPERFAMILY Protein kinase-like (PK-like) 15 311 IPR011009 -
Psa5g6728 522 ProSitePatterns Protein kinases ATP-binding region signature. 24 48 IPR017441 GO:0005524
Psa5g6728 522 Pfam Protein kinase domain 18 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6728 Psa-Chr5 559064113 559065681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6728 1 500 MAP Kinase Kinase Kinase Kinase AT4G14480 55.888 6.90e-179 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Psa5g6728 Pkinase 4.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6728 K08835 - gmx:100820227 641.728