Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6697 ATGGAGCATCACAAAGAGATAATCAAGAGTGGGTGCCATAAGATTCTTCAAGGAATCAATTCAATGTCTTTGGTGAATTTAGATGACCAGCAAGTTCATTCCTTAGTGATGATGAGAGAAATTGCGCGTGGGGTTGTTGATGGTCGAGATAGAAAGGTGACTAAGAATGGCGTGATTACTGCGTTGCATTACAGCATTGAGAAAATGGTGTGTGCATCCAGAGATATCATTCATATGTTAAGTAGGATGTCCTATGAAGGCTTGGATGACCAGAGGATGCATTTAGTTTTGAGGATGAAAGAAATTGCACATGGGATTGTTGATAAGCAACCTAGAGTTGCAATAACTAGGTCTGAGATACTTGCGGACCAAGTTTGCTTTGTGGATGAAGAGGCGAGAGATAGCCCTGTGGTTGATTCAATCAAGATCAGCAATGGGGATATTCTAATTGATGAGGCACAAAGCATGATGCATGAAGATGAGATGTTGGACGTGGATCAGGTTTTAAGATTTGAAAATGGGATAGATGAAGTAGAAGAGTCTCTAATGTCATCGGGCTTTCAGCAATTTCTTCTGTGGCCTTCCGATGATTACATCACCATTGAGTGGGTTCAGGACATGATGTTCATCCTTGAGAAGGCTTCACAGAAGACATTGCCAACTGAATTCTGTCATGTTGTGCAGACCTTTGTGGTGTTCAAATTGATAGATGCTGCTTGTAATGTTTTATGTAAAGAACCAAACTGTGTGGAGATTAATTGCCTCGGAGAAGATTCAAAAGTCATTGTTGTAGGCGATATACATGGGCAGTTTCATGATTTAATGTTTCTTTTGAAGCATGCAGGAATGCCTTCTGAGAACCAGTTTTATATTTTCAATGGTAATTATGTTGATGAAGGAGCTTGGGGCATTGAGGTGTTCTTGGTCTTGCTAGCTTGGAAGGTCTTGATGCCTCACAGAGTATATCTACTCCGTGGAAATCATGAATCAAGATATTGCACTGCACAATATGGTTTTAAGAAGGAGGTACAGACCAAATATGGCAATCAAAGTGAAGATGTGTACAATAAATTCCTAGAGTGTTTCAAGGAACTTCCATTGGCGTCAGTTATTGCCAACCGTGTTTATACTACTCATGGGGGGCTTTTCCGCAGCATTCATGCTGCTGCTTCCCCTTCAGAAAAGCCAAAATGGAAAATGACACCAAGGATGGACCTTGGTTCCTTAGTTGATTTATCTCAAGTTAAAAGAACTTGCATAGATTCTCCACATGAGGGTCCTAACATATTATTGAGTGACATTCTCTGGTCAAAACCATCGAATAGGGATGGTCTGAGGGTTAACGCAGGTCGAAAATTAGGTTTATGGTGTGGTCCTGATTGTACCGAGGCTTTCTTAAAGCAGCACAATTTGAAGCTGATCATCAGATCACATGAAGGACCAGATGCAAGGGCTGGTAGGGATGATTTTGGAGATATGTTGAACGGGTACAGCATAGATCATGATGGCGAGTCAGGAAAGCTATATACACTTTTTAGTGCTCCAGATTACCCGCAGTTTGGGGGGAAGACATATAACAATGAAGGAGCATATGCAATATTGAAGTCGCCTGATTTTGCAACTCCTTCCTTTCAGTCATTTAAATCAGCAGAAAGACCCATGGTGTATCCTTATATTGATTTTGATGCTGATGACATGGACTCAAGTAAACTTGACTCTTCTCAAATCAGGCCTCAACCTCCACCTTTTCTGCTCCTCAAGATGCGTCGAGACCCGAATTTGACTTTGAGTCATTAG 1797 0.4124 MEHHKEIIKSGCHKILQGINSMSLVNLDDQQVHSLVMMREIARGVVDGRDRKVTKNGVITALHYSIEKMVCASRDIIHMLSRMSYEGLDDQRMHLVLRMKEIAHGIVDKQPRVAITRSEILADQVCFVDEEARDSPVVDSIKISNGDILIDEAQSMMHEDEMLDVDQVLRFENGIDEVEESLMSSGFQQFLLWPSDDYITIEWVQDMMFILEKASQKTLPTEFCHVVQTFVVFKLIDAACNVLCKEPNCVEINCLGEDSKVIVVGDIHGQFHDLMFLLKHAGMPSENQFYIFNGNYVDEGAWGIEVFLVLLAWKVLMPHRVYLLRGNHESRYCTAQYGFKKEVQTKYGNQSEDVYNKFLECFKELPLASVIANRVYTTHGGLFRSIHAAASPSEKPKWKMTPRMDLGSLVDLSQVKRTCIDSPHEGPNILLSDILWSKPSNRDGLRVNAGRKLGLWCGPDCTEAFLKQHNLKLIIRSHEGPDARAGRDDFGDMLNGYSIDHDGESGKLYTLFSAPDYPQFGGKTYNNEGAYAILKSPDFATPSFQSFKSAERPMVYPYIDFDADDMDSSKLDSSQIRPQPPPFLLLKMRRDPNLTLSH* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6697 598 SUPERFAMILY Metallo-dependent phosphatases 222 558 IPR029052 -
Psa5g6697 598 ProSitePatterns Serine/threonine specific protein phosphatases signature. 324 329 IPR006186 GO:0016787
Psa5g6697 598 Gene3D - 195 577 IPR029052 -
Psa5g6697 598 Pfam Calcineurin-like phosphoesterase 260 481 IPR004843 GO:0016787
Psa5g6697 598 SMART pp2a_7 227 551 IPR006186 GO:0016787
Psa5g6697 598 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 4 573 - -
Psa5g6697 598 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Psa5g6697 598 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Psa5g6697 598 PRINTS Serine/threonine phosphatase family signature 323 347 IPR006186 GO:0016787
Psa5g6697 598 PRINTS Serine/threonine phosphatase family signature 360 386 IPR006186 GO:0016787
Psa5g6697 598 PRINTS Serine/threonine phosphatase family signature 413 440 IPR006186 GO:0016787
Psa5g6697 598 PRINTS Serine/threonine phosphatase family signature 507 523 IPR006186 GO:0016787
Psa5g6697 598 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 4 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6697 Psa-Chr5 557916860 557922953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6697 191 473 Calmodulin-binding Proteins AT5G63870 50.512 7.10e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6697 K04460 - gmx:100779241 729.939