Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6695 ATGGCACGTGGGAGGAGGATTAGGGCTAGGCTCCGCAGGAGTAATCTATACACATTTGGTTGCCTTCGGCCGACTACGGCTGAGGAGGTGCCTCATCCACTTCAAGGTCCTGGTTACTCAAGAACCGTGTATTGCAACCAGCCTCAAGTTCATGAAAAGAAAAATCTATTTTACTGCAAGAATAATATATCAACGACCAAATACAATGCTATCATGTTTTTACCTAAGGCACTGTTTGAACAGTTTCGAAGGGTTGCCAACATATACTTCCTTTTGGCTGCTTGCCTCTCGGCATCTCCAATTTCACCTTTCACTTCGGTGAGCATGATTGCTCCTTTGGCCTTTGTTGTGGGGCTTAGTATGGCAAAGGAAGCATTGGAGGATTCGCGCAGGTTTCTTCAGGATGTCAAGGTTAATCGCCGGAAAGCTAGTCTCCATAGAGGCAACGGGGTTTTTGATCTCAGGTCATGGCAGAAAATTATGGTGGGAGATATAGTAAAAGTAGAAAAGGATCAATTTTTTCCAGCTGACTTGCTTCTCTTGTCTTCAAGTTACGAGGATGGGATATGCTATGTGGAGACCATGAATTTGGACGGAGAGACCAACTTGAAGGTGAAAAGATCTTTGGAGGCTACCTTGTCCCTTGATAATGATGGAGCTTTTAAGGATTTCGCCGGAACAATTCGTTGTGAAGACCCGAATCCCAATCTGTACACTTTTGTTGGGAATTTTGAATATGAACGTCAGGTTTATCCTCTTGATCCTGGTCATATTCTCCTCCGAGATTCAAAGCTTAGGAACACTGATTATGTCTATGGGGTGGTCATTTTCACTGGCCACGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAAAGAAGCACAATAGAGAAAAAGATGGATTATATCATATACACTCTTTTCACTGTTCTTATATTGATATCCTTTATAAGTTCAATAGGATTTGTTGCTAAGACGAAGTACCAGACCACAGAGTGGTGGTATATACGGCCTGACGATATTGAATATCAGTATGATCCTGCGAAAATTGGATTGGCTGGGATGAGCCATCTGATCACTGCACTTATTCTATATGGATATTTGATACCCATCTCTCTTTATGTTTCAATTGAGATTGTGAAGGTATTACAGGCCACCTTCATTAACCAAGACCTTCAAATGTATGATGAAGAAACTGGGACTCCTGCCGAAGCACGAACGTCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACCATCCTCTCTGATAAAACTGGCACTTTAACCTGCAATCAGATGGATTTTTTGAAGTGCTCCATTGCTGGTACTTCCTATGGTGTACGTTCCAGTGAAGTTGAACTCGCTGCAGCAAAGCAGATGGCTTCTGATCTCGAGGAGGAAGATATGGATGTCTCTAATTTCCCCATGCATAAGAAGGGTAAAGTGCCACGGGAAAATGTTAGAAGAGCTGAAGAAATTGAACTTGAGCCAGTTGTTACTTCTAAGGGTGGTGAGGATCAAAGGCCTACCATAAAGGGATTTGGTTTTGTTGACAGCCGCCTCATGAATGGAAACTGGTTGAAAGATCCCAATGCTGATGTCATTTCGTTGTTTTTCCGGATACTGGCAGTTTGCCATACTGCCATTCCTGAGCTTAATGAGGAGAGTGACAGTTGTACTTATGAAGCTGAATCACCCGATGAAGGGGCTTTTCTTATAGCAGCTAGAGAGTTTGGTTTTGAATTTTATAGAAGAACCCAATCAAGTGTTGTTGTACGCGAAATAATTTCTGCTTCAGGACAAGTGGTTGAAAGAGAGTATAAAATATTGAATCTGCTGGATTTTAGTAGCAAAAGAAAGCGTATGTCAGTGATTGTACGTGATGAGGAGGGAAGCATTATTCTTTTATGCAAAGGAGCTGACAGTATCATATTTGATCGATTATCTAAGAATGGAAAGAAGTATTTGGAGGCTACTTCTAGACATTTGAATGAATATGGAGAAGTGGGTTTGAGAACACTAGCCCTGGCTTACAGAATTCTTGATGAACAAGAATATTCTGATTGGAACAGCGAGTTTCAGAAAGCCAAGACAACTGTTGGGCCTGACAGAGAGGCAATGCTCGAGAAGGCATCAGATAGTATGGAAAGAGAGTTGATTCTTGTCGGGGCTACTGCTGTGGAAGACAAGCTGCAGAAAGGGGTGCCGCAATGCATTGATAAACTTGCTCAAGCCGGTCTAAAGATCTGGGTTTTGACGGGGGATAAGATGGAAACTGCAATCAACATTGGATATTCATGTAGTTTGCTTCGACAGGGTATGAAGCAAATCTGTATATCTACTACAAGTTCAGATTCAGTAATCAATGATAGGAAAGAGGTAATCAAAGGCAACATCCTGACTCAAATCACCAATGCCTCACAATTGATGAAGCTGGAGAAGGACCCACATGCTGCACATGCATTAATTATTGACGGAAAAACTCTAACATATGCTTTAGAAGATGATATCAAACACCAGTTTTTGGCATTAGCTGTTGATTGTGCGTCTGTTATTTGCTGCCGTGTGTCTCCCAAGCAAAAGGCCTTGGTAACAAGGTTAGTGAAAGAAGGAACTGGGAAAACCACTTTAGCAATAGGTGATGGTGCAAATGATGTCGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGGAATGCAGGCTGTGATGGCTAGTGACTTTTCCATTGCTCAATTTCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGTTATTTCTTCTACAAAAATATAGCATTTGGCCTCACCATATTCTATTTCGAGGCCTTTGCGGGCTTCTCTGGTCAATCGGTTTATGATGACTGGTACATGATATTGTTTAATGTAGTCCTTACATCGTTGCCCGTAATTTCACTTGGAGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTATATCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATACTGGGGTGGATGGGGAATGGTCTGTACTCCTCCCTAGTCATCTTCTTCCTTGTTATCCTCATCTTCTATGACCAAGCATTCCGCCTGAATGGCCAGACTGCAGACATGGCTACTGTTGGTACCGTAATGTTCACCAGCATCATCTGGGCTGTCAACTGCCAGATTGCCTTGACAATGAGCCATTTTACATGGATACAACACCTATTTGTGTGGGGAAGCATAGCCAGTTGGTACCTCTTTCTCTTTTTATATGGCATGCTTGGTCCAAGACTCTCCAAATCTGCCTACCAAATATTGGTTGAAGTGCTTGCTCCTGCTCCTATTTATTGGACAGCAACGATTCTAGTAACAGTTACGTGCAATCTTCCTTATCTTGCCCACATATCATTTCAAAGGTGTTTTAATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAGAAGGACATTGAAGATCAACACATGTGGACGAGGGAGCGGTCTAAAGCAAGACAAGAAACAAAGATTGGATTCTCTGCAAGAGTGGAAGCAAAGATCAGGCAGCTGAGAGGGAGGCTGCAGAAGAAGCAATCTTCAACGGGGGCATCCCCATCATGA 3672 0.4235 MARGRRIRARLRRSNLYTFGCLRPTTAEEVPHPLQGPGYSRTVYCNQPQVHEKKNLFYCKNNISTTKYNAIMFLPKALFEQFRRVANIYFLLAACLSASPISPFTSVSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKASLHRGNGVFDLRSWQKIMVGDIVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEATLSLDNDGAFKDFAGTIRCEDPNPNLYTFVGNFEYERQVYPLDPGHILLRDSKLRNTDYVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISFISSIGFVAKTKYQTTEWWYIRPDDIEYQYDPAKIGLAGMSHLITALILYGYLIPISLYVSIEIVKVLQATFINQDLQMYDEETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVELAAAKQMASDLEEEDMDVSNFPMHKKGKVPRENVRRAEEIELEPVVTSKGGEDQRPTIKGFGFVDSRLMNGNWLKDPNADVISLFFRILAVCHTAIPELNEESDSCTYEAESPDEGAFLIAAREFGFEFYRRTQSSVVVREIISASGQVVEREYKILNLLDFSSKRKRMSVIVRDEEGSIILLCKGADSIIFDRLSKNGKKYLEATSRHLNEYGEVGLRTLALAYRILDEQEYSDWNSEFQKAKTTVGPDREAMLEKASDSMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYSCSLLRQGMKQICISTTSSDSVINDRKEVIKGNILTQITNASQLMKLEKDPHAAHALIIDGKTLTYALEDDIKHQFLALAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLVIFFLVILIFYDQAFRLNGQTADMATVGTVMFTSIIWAVNCQIALTMSHFTWIQHLFVWGSIASWYLFLFLYGMLGPRLSKSAYQILVEVLAPAPIYWTATILVTVTCNLPYLAHISFQRCFNPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFSARVEAKIRQLRGRLQKKQSSTGASPS* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6695 1223 Gene3D - 725 921 IPR023214 -
Psa5g6695 1223 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Psa5g6695 1223 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Psa5g6695 1223 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Psa5g6695 1223 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1217 - -
Psa5g6695 1223 SFLD p-type atpase 405 932 IPR044492 -
Psa5g6695 1223 SFLD Haloacid Dehalogenase 405 932 - -
Psa5g6695 1223 Pfam Cation transport ATPase (P-type) 546 651 - -
Psa5g6695 1223 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1159 IPR032630 -
Psa5g6695 1223 SUPERFAMILY Calcium ATPase, transduction domain A 147 287 IPR008250 -
Psa5g6695 1223 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Psa5g6695 1223 Gene3D - 110 289 - -
Psa5g6695 1223 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Psa5g6695 1223 Gene3D - 420 434 IPR023214 -
Psa5g6695 1223 Coils Coil 449 469 - -
Psa5g6695 1223 CDD P-type_ATPase_APLT_Dnf-like 61 1041 - -
Psa5g6695 1223 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Psa5g6695 1223 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1152 IPR023298 -
Psa5g6695 1223 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 851 962 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g6695 1223 Gene3D - 435 500 IPR023299 GO:0000166
Psa5g6695 1223 Gene3D - 591 724 IPR023299 GO:0000166
Psa5g6695 1223 SUPERFAMILY HAD-like 411 925 IPR036412 -
Psa5g6695 1223 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6695 Psa-Chr5 557835208 557842793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6695 1 1217 Primary Pumps ATPases AT1G17500 75.534 0.0 1910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6695 K01530 - gmx:100778710 2164.81