Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6690 ATGGCGTACCAGACCTCCAATCACGAATCAGGTTCCGATTCAAATAACCAAAAACGACTCTACAATCCCTACAAAGACCTCGAAGTACCCATTCGAAACCTCTACCAGCTCCCAACCTCACCCGAGCACCTTTTCGTCGAGGAGGCTGCCCGAAAGCACCGCTCCTGGGGAGAAACCCTAACTTTCCTCACCGGCTGCGGCTACCTCGGCGGAGCCGTTGCCGGCGCCGGCGTAGGTCTCGTCGAAGGCGTTAAATCGTTCGAGTCAGGAGATACCATGAAGCTCAGAGTCAATCGGATTCTCAACTCGTCAGGTCACACCGGTCGGACGTGGGGTAACCGGCTCGGTGTGATCGGGTTGCTTTACGCTGGCATTGAGAGCGGGATCACGGCCGCGAGAGATACCGACGATGTGTTGAACAGCATAGCAGCAGGGCTTGGCACTGGCGTGTTGTATCGAGCTGCGAGAGGGGTTAGATCAGCTGCTGTAGCAGGTGCTGTTGGTGGAGTTGTGGTCGGAGTGGCTGTCACGGCGAAGCAGGCGTTGAAACGCTACGTGCCAATTTGA 567 0.5661 MAYQTSNHESGSDSNNQKRLYNPYKDLEVPIRNLYQLPTSPEHLFVEEAARKHRSWGETLTFLTGCGYLGGAVAGAGVGLVEGVKSFESGDTMKLRVNRILNSSGHTGRTWGNRLGVIGLLYAGIESGITAARDTDDVLNSIAAGLGTGVLYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6690 188 PANTHER TIM23 12 188 IPR045238 GO:0022857
Psa5g6690 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 64 171 - -
Psa5g6690 188 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE 12 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6690 Psa-Chr5 557733382 557736145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6690 6 188 Chloroplast and Mitochondria Gene Families AT1G72750 67.742 5.16e-79 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6690 K17794 - gmx:100777112 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6690 5 557733382 557736145 Psa4g4262 4 376167388 376169093 PCT