Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6689 ATGTCATCATCTTCAAACGAAGAAGAAGTTTCCTCCTCCACCTTGGTCGCCATTGATACTGACAAGAACAGCAAACACGCTGTAAAGTGGGCTGTTGATCATCTCTTGGAGAAGAACTCTTCATGCACACTCATTCACGTTAAAACCAAATCCTTGAATCGAAATGAATTTGATTCTGAAACCAAAGAAGGCCGTCCTCCGACGGAAGAAGAATTGCATCAGCTTTTTCTTCCTTTTCGTGGTTTTTGTGCTCGAAAAGGGATTGTAGCAAAGGAGTTGGTTCTGCAAGACTCTGATGTTTCGAGCGCACTTTATGATTACATCATTGATCACTCAATCGTCGACGTTGTTCTCGGTGCTCCTCGCTGGAATAATGCTCTTATAAGGAAATTTAAAGATGTAGATGTGCCAACAAGCTTAATAAAATCTCTGCCAGTGTCATGCACAGTTCATATTATATCAAAAGGAAAAGTGCAGAATGTTCAAGCAATAGTTCCTATTCAAACCATGACTATTTCTAGTCCTAAGCCAAGTTATTTGTCCAAAGATTTACATAGAACATCATTCGAGCCTAGACTCGGGCGGCGCTTAAGTAACGACGGTGGAACCTTTAGTCAAAACATGGACGCAAGACTAGGATCAAGATGTATGTCTCAAAGAGATACTTATCCATCAAGAATATCAGTGTTAGATGAAAACCAAGATAATGGCATGGCGAGAGAGATAAATAGGTTCAAACAAGAGCAAAAGTTAACAAAGAAGGGTAGGTCGGCGTCGGTTGGTAGAGCAGTCGGTTCTTCGAAACAGAAGATAAAACCGAAAGGAGTAGAAGAAACTGAAGAGAGGATAGGAACATCAAATGAGAATGTAGACAACAACTATATGTTTAAAACATACAATATTGAAGAAATTGAAATTGGAACAAATTACTTTGATCTTGATGCCAAAATTGGTGAAGGTGGATATGGACCTGTTTTCAAAGGAGTACTTGATAACACTGATGTTGCAGTTAAGGCCTTAAGACCAGACATAACTCAAGGGGAGAAGCAATTTCATCAAGAGGTCCTTGTTTTAGGCTCCATAAGACATCCCAACATTGTAGTACTTCTAGGCGCCTGTCCGGAATTCGGGTGCCTCGTGTACGAGTATCTAGAGAACGGAAGCTTAGAAGATCGCCTTTATCAGAAAGACAACACGCCGCCAATTCCATGGAGGACTAGATTCAAAATAGCATCAGAGATTGCAACAGGCCTTCTTTTCCTTCACCAAACAAAACCAGAACCGGTCGTGCATCGCGACCTCAAGCCAGCAAACATTCTCTTAGACAGAAACTACGTGAGCAAGATCACCGATGTTGGTTTGGCGAGACTAGTTCCTCCTTCTATCGCCAACAAAACCACTCAATATCATAAGACAGCTGCAGCCGGAACATTTTGCTATATCGATCCGGAGTATCAACAAACAGGACTATTAGGCGTAAAGTCAGACATATACTCATTAGGAGTGATGTTCTTACAGATCATTACTGGAAAGCCGCCTATTGGCGTGGCTCGTCTGGTTGAAGAGGCCATTGAGAATGATAATCTTGCAGCGGTGTTAGACTCGAATGTGACCGATTGGCCGGTCGAAGAAACTTTATCATTTGCTAAAATGGCATTGAAGTGCTGCGAGATGAGAAAAAAGGATAGACCAGCTCTTGCTACTGTGATTTTGCCAGAGCTTAATAGACTCAGAGATCTATAA 1743 0.4165 MSSSSNEEEVSSSTLVAIDTDKNSKHAVKWAVDHLLEKNSSCTLIHVKTKSLNRNEFDSETKEGRPPTEEELHQLFLPFRGFCARKGIVAKELVLQDSDVSSALYDYIIDHSIVDVVLGAPRWNNALIRKFKDVDVPTSLIKSLPVSCTVHIISKGKVQNVQAIVPIQTMTISSPKPSYLSKDLHRTSFEPRLGRRLSNDGGTFSQNMDARLGSRCMSQRDTYPSRISVLDENQDNGMAREINRFKQEQKLTKKGRSASVGRAVGSSKQKIKPKGVEETEERIGTSNENVDNNYMFKTYNIEEIEIGTNYFDLDAKIGEGGYGPVFKGVLDNTDVAVKALRPDITQGEKQFHQEVLVLGSIRHPNIVVLLGACPEFGCLVYEYLENGSLEDRLYQKDNTPPIPWRTRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNYVSKITDVGLARLVPPSIANKTTQYHKTAAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMFLQIITGKPPIGVARLVEEAIENDNLAAVLDSNVTDWPVEETLSFAKMALKCCEMRKKDRPALATVILPELNRLRDL* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6689 580 Pfam Protein kinase domain 313 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6689 580 SUPERFAMILY Protein kinase-like (PK-like) 293 569 IPR011009 -
Psa5g6689 580 CDD STK_N 16 156 - -
Psa5g6689 580 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 123 - -
Psa5g6689 580 Gene3D Transferase(Phosphotransferase) domain 1 384 579 - -
Psa5g6689 580 SMART serkin_6 311 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6689 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Psa5g6689 580 PANTHER OS02G0152300 PROTEIN 266 580 - -
Psa5g6689 580 PANTHER OS02G0152300 PROTEIN 13 209 - -
Psa5g6689 580 ProSiteProfiles Protein kinase domain profile. 311 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6689 580 Gene3D HUPs 13 153 IPR014729 -
Psa5g6689 580 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 266 580 - -
Psa5g6689 580 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 13 209 - -
Psa5g6689 580 Gene3D Phosphorylase Kinase; domain 1 286 383 - -
Psa5g6689 580 Pfam Universal stress protein family 15 126 IPR006016 -
Psa5g6689 580 MobiDBLite consensus disorder prediction 249 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6689 Psa-Chr5 557713087 557715654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6689 265 580 Receptor kinase-like Gene Family AT5G12000 62.025 7.76e-145 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Psa5g6689 Pkinase 9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6689 - - gmx:100802306 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4254 4 375936762 375940017 Psa5g6689 5 557713087 557715654 PCT