Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6679 ATGATGGTGGCTAGAGCATTAGAACTTAATGAGACCCTAAATCCAAGTAGAGTTCACATGGAAAACACGTTACTTGCAACCCACGTCTTTAGAGGGAAGGATGTTGAAAGTGCATTGGTGCATGTGAACAGCTCCATGCCTCTCTCTACCGTCACACGGTGCCTATTCAGTTTGTGTCAAGGAGTGGCGGCAGCAGCAGCACCTCCACATCCAAACTTGCAGTGGCATTACTATGAGTTCAACACTACATGCCGCTACGCAGAGGAGTATGTCCGGCACCAAGTGAAGCTGATATATGATCATGACAAAAGTATTACTGCTAAGCTACTACGCTTGGTTTACTCCGACTGTTTCGTCACTGCAGGTGCACCAGGTTATCCAGTTTTCACAGGAAGAAAGGATGGCATGAAATCAGATGCTGCATCAGTAGACCTGCCATCACCATCCATCTCATGGCAGGATGCTCTAACATACTTCAAATCAAGGGACTTGGATGTAATAGATTTGACAACACTCTTAGGGGCACACACATTGGGCCAAACACATTGTAGCCACATTGTCGATAGGCTGTATAATCACAGTGGTACTGGAAACTCAGACCCAAGCATGGATGCTACTTTTCGAGACTATATGCGAAAACTTTGTCCCCCGAAAACAAAGAAAGGACAACATGACCCACTGGTATTCCTAAACCCAGAATCTGGTTCAGATTACACCTTCAGAGAATCATACTACAATAGGATCCTGCGCGACGAAGCTGTCCTGGAAATTGATCAACAACTACTAAATGGTGACGATACTAAAGAGATCATTGGAGAATTTGCTGATGGATTCGAAGATTTTAGGAGAACTTTTGCAGAATCCATGTACAAAATGGGAAATATCAATATTTTAACCGGAAATCAAGGACAGATACGCCAAAATTGTCGATTCACAAATAAGGGAAACCCAAATTAG 957 0.4357 MMVARALELNETLNPSRVHMENTLLATHVFRGKDVESALVHVNSSMPLSTVTRCLFSLCQGVAAAAAPPHPNLQWHYYEFNTTCRYAEEYVRHQVKLIYDHDKSITAKLLRLVYSDCFVTAGAPGYPVFTGRKDGMKSDAASVDLPSPSISWQDALTYFKSRDLDVIDLTTLLGAHTLGQTHCSHIVDRLYNHSGTGNSDPSMDATFRDYMRKLCPPKTKKGQHDPLVFLNPESGSDYTFRESYYNRILRDEAVLEIDQQLLNGDDTKEIIGEFADGFEDFRRTFAESMYKMGNINILTGNQGQIRQNCRFTNKGNPN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6679 318 Gene3D - 121 313 - -
Psa5g6679 318 Gene3D Peroxidase, domain 2 146 292 - -
Psa5g6679 318 PANTHER PEROXIDASE 61-RELATED 56 120 - -
Psa5g6679 318 PANTHER PEROXIDASE 61-RELATED 120 311 - -
Psa5g6679 318 Pfam Peroxidase 121 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g6679 318 Gene3D - 73 120 - -
Psa5g6679 318 ProSiteProfiles Plant heme peroxidase family profile. 107 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g6679 318 SUPERFAMILY Heme-dependent peroxidases 76 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g6679 318 PANTHER PEROXIDASE 25-RELATED 120 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g6679 318 PANTHER PEROXIDASE 25-RELATED 56 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g6679 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 168 178 IPR019793 -
Psa5g6679 318 PRINTS Plant peroxidase signature 122 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g6679 318 PRINTS Plant peroxidase signature 167 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g6679 318 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g6679 318 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g6679 318 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6679 Psa-Chr5 557017484 557019497 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6679 107 313 Peroxidase AT2G43480 58.937 3.42e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6679 K00430 - gmx:100797875 303.138