Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6658 ATGGTAATGATTCAACGATATATGGGTGTCATAAAATCTGTATTTTGCATTGTTTTGGTTCTCAATATTGTAGAAGCTATCAGCATTGAAGAAAGCAAGGAAACAAAAGAGTTTATTACCAAATTATTTGATCCTGCGTCTGGATTATTGGATGATGACACGGCAGAGATTCTATGGGTCACTTGCATGGAAGATTTGATTCATGTAAGGAAAGACATCGGAGATCTTGGCTTATGCCTACCAAGGGAATCACATAGTAGAGCCAATGAAGTTACCTCAGAATTCAGATCAATTACAAGAGAAAACATCCAAATTTTGATTAGTACTTGCAATCCACAGTTGAAGGAAAACTTTCTTAACTGTTTGAGAAAAAACAGCGTTCCATTACAAGATCAATCCAAGAGTTGGAACACTGCTTACGAGGGATCAGGTTCATCCAAAAGATATCCGCGTCGAATTTCGCCTCGATACTTAGCAGAAAAACAAGACGAAGATGGTGCCAATAATGGATCTTCTAAAAAAGATAAAAGTGATAGTGATTCTGATAAATCATCGAAGAAGAAGTCGTCGAAGTCTTCTGACTCTAAAAGTAAACAACACGAGAAAGCGATTTATAATGCCATAGCTATGATTGCAATGGTGACATTTGTATTTGCAGTATGTATCTTTTTATGTTGTTGTAGGTGTTGTGGAAGTGGTAGAGTTAATCAAACCGATGAAAGGCCACTTCTCAGCATGAGCAGGAGTGATTACTCTGTTGATTCTTCTTCAAATAATAACTCCTCAAAAATTTCAATAAATGAGGAGAGACATGGAATTCAATCAATAAGTAGTATTTTGGCTGACGAGAAAAAGAACTCGATAAAAGAAGATGCTGCAAGACCATCATTTGACCTTAAACCTCCACCTGGTAGGGTAGAAAGTGCTATTCCACCTTTGAAACCTCCACCTGGTAGGGTAGGAAGTGCTATTCCACCTTTGAAACCTCCTCCAGGAAGACCTGATCCTCTTCCACCCGAACCACCATTAGTTAAGACTTTTGATTATGCCGTTAATCCACCGCCACCACCTCCTCCCCCTAGACTTCAAACGCCTAGCAGTGGTGCTGTTCTTCCTCCCGGACTACCGAGGCCTGGCGGTGGTGGCTCTCCTCCACCTCCACCGCCGAAACTTGGCAATAGTGGTCCTAACCCTCCTCCTCCACCACCACCACGTGGAAAACCAGGCGGTCCTCGACCGCCACCACCTCCTAAGAGTGGTGGAGGTCCTCCAAGACCTCCACCTGCATTTGGTCAAAAAGGTACTAGACCTTTACATGGTGGACCAAAGGTTCAAGGGAACGTTGAATTTAGTTCAGAAGGTGAAGGTGAATCTGATGATGCTCCTAAAACCAAGTTAAAGCCTTTTTTCTGGGATAAGGTTCAAGCCAACTCAGATCAAACTATGGTTTGGAATCAACTCAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAAACCCTTTTTGGATATAGTACTCCATCAATGGAGAAAAAAGGTGGACAGAAGAAAGATCCTTCCTTCCGTGATGCTCCACCTCAGTTTGTTCAAATCATTGAGGCAAAGAAAGCACAAAATTTATCAATTTTGTTGAAAGCATTAAATGTGACACTAGAAGAAGTCCGTGATGCACTACTTGAAGGAAATGAGCTCCCAGCAGAATTTCTTCACACACTGATAAAAATGGCACCAACATCAGAGGAAGAACTTAAGCTTAGACTTTTCAGTGGTAGTATTTCTCAACTTTGTCCTGCAGATCGGTTCCTTAAAGCCCTGGTTGAGATTCCCTTTGCTATTAAACGAATGGAAACATTGCTTTACATGAGTACTCTTCAAGAGGAACTCACATCTACCCGAGATTCGTTCTCAATTTTAGAGGTTGCTTGTAAGGAACTAAGGAGCAGTAGGTTATTCCTCAAGCTTCTTGAAGCTGTTCTTAAAACAGGAAACCGAATGAACGATGGAACATTCCGCGGGGGTGCACTTGCATTCAAACTTGACACGCTACTAAAATTATCTGATGTAAAAGGAGTAGATGGGAAAATCACCCTCTTACACTTTGTTGTTCAAGAGATAATGCGAACAGAAGGAATAAGAGCGGCTCGAATGGTGAAAGAGAGCAGCAGTTTCTCTAGTATAAAAACCGATGACCTTCTCGAAGAGGTTAATCATGAATCAGAAGAACACTACCGTGAAGTAGGTCTCCAAGTTGTTTCACATTTGAGCAACGATCTTGAGAATGTGAAGAAAGCGGCAGCACTAGATGCGGATGGCTTGACGAGCACAACAGCTAGGTTAGGCTACGGTCTTATAAATACGAGAGATTTCTTTAACAAAGAACTGGTGAACAACTTAGAGAACGATAAAGGGTTCCATGAGACAGTTAAGAGGTTTGTGGAGAAAGCTGAAGTTGAAGTCACAGGTTTGTTAGAAGAGGAGAAGAAAATCATGGCTCTTGTGAAGAGTACGGGTGATTACTTTCATGGGAGTACGGGGAGAGATGAAGGGCTGAGATTGTTTGTAATAGTACGCGATTTCTTAATAATGTTGGATAAGGTATGCAGAGAGATTCAAAAAGCACCCAAGAAGCCAATAAAGAATGTGAAACAAGATAAAACTAATGCTAATGCTAATTCTAAACCGGCAACGCCGGAAACGCGTCCTCCACCTCCAGATATTCGTCAGCGGTTGTTTCCGGCTGTGGTAGAGAGGAGAGTGAGGGATGATTTTAGTTCAGATGAAGACAGTCCATAG 2796 0.4163 MVMIQRYMGVIKSVFCIVLVLNIVEAISIEESKETKEFITKLFDPASGLLDDDTAEILWVTCMEDLIHVRKDIGDLGLCLPRESHSRANEVTSEFRSITRENIQILISTCNPQLKENFLNCLRKNSVPLQDQSKSWNTAYEGSGSSKRYPRRISPRYLAEKQDEDGANNGSSKKDKSDSDSDKSSKKKSSKSSDSKSKQHEKAIYNAIAMIAMVTFVFAVCIFLCCCRCCGSGRVNQTDERPLLSMSRSDYSVDSSSNNNSSKISINEERHGIQSISSILADEKKNSIKEDAARPSFDLKPPPGRVESAIPPLKPPPGRVGSAIPPLKPPPGRPDPLPPEPPLVKTFDYAVNPPPPPPPPRLQTPSSGAVLPPGLPRPGGGGSPPPPPPKLGNSGPNPPPPPPPRGKPGGPRPPPPPKSGGGPPRPPPAFGQKGTRPLHGGPKVQGNVEFSSEGEGESDDAPKTKLKPFFWDKVQANSDQTMVWNQLKAGSFQFNEEMMETLFGYSTPSMEKKGGQKKDPSFRDAPPQFVQIIEAKKAQNLSILLKALNVTLEEVRDALLEGNELPAEFLHTLIKMAPTSEEELKLRLFSGSISQLCPADRFLKALVEIPFAIKRMETLLYMSTLQEELTSTRDSFSILEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGALAFKLDTLLKLSDVKGVDGKITLLHFVVQEIMRTEGIRAARMVKESSSFSSIKTDDLLEEVNHESEEHYREVGLQVVSHLSNDLENVKKAAALDADGLTSTTARLGYGLINTRDFFNKELVNNLENDKGFHETVKRFVEKAEVEVTGLLEEEKKIMALVKSTGDYFHGSTGRDEGLRLFVIVRDFLIMLDKVCREIQKAPKKPIKNVKQDKTNANANSKPATPETRPPPPDIRQRLFPAVVERRVRDDFSSDEDSP* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6658 931 Pfam Formin Homology 2 Domain 458 864 IPR015425 -
Psa5g6658 931 PANTHER FORMIN-LIKE PROTEIN 180 929 - -
Psa5g6658 931 PANTHER FORMIN-LIKE PROTEIN 4 134 - -
Psa5g6658 931 PANTHER FORMIN-RELATED 4 134 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa5g6658 931 PANTHER FORMIN-RELATED 180 929 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa5g6658 931 Gene3D Formin, FH2 domain 461 900 IPR042201 -
Psa5g6658 931 ProSiteProfiles Formin homology-2 (FH2) domain profile. 456 890 IPR015425 -
Psa5g6658 931 Coils Coil 538 558 - -
Psa5g6658 931 MobiDBLite consensus disorder prediction 292 444 - -
Psa5g6658 931 SMART it6_source 456 879 IPR015425 -
Psa5g6658 931 MobiDBLite consensus disorder prediction 248 269 - -
Psa5g6658 931 MobiDBLite consensus disorder prediction 158 199 - -
Psa5g6658 931 SUPERFAMILY Formin homology 2 domain (FH2 domain) 527 889 - -
Psa5g6658 931 MobiDBLite consensus disorder prediction 377 431 - -
Psa5g6658 931 MobiDBLite consensus disorder prediction 305 366 - -
Psa5g6658 931 MobiDBLite consensus disorder prediction 878 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6658 Psa-Chr5 556113285 556118574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6658 459 920 FH2 protein (formin) Gene Family AT5G54650 64.795 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6658 - - gmx:100792872 721.079