Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6643 ATGGAGTTTGAGATTGATGACTCCAATAATGGTGATGCAGTAGGAAATGTTACTACTGGAGAGGTTAGCAGTAGCACAGCTGACAAAGTTGACTGCAGTTCTTTTGATCCAACTGATGAACGGGATCAAGACGATAATATGACTCAAGATTCTTCTGGAGTGGACCAAATCCCGTTAGCAATTACTGCATTATCGGCTGTGAGAACAGTTGATGAACCCTACATGGGTCAGGAGTTTGTATCGGAAGCTGAAGCTCATGCATTTTATAATGCATATGCTACACGTGTTGGATTCGTCATACGTGTAAGTAAGCTCTCGAGGTCAAGGCGTGATGGGTCTGTTATCGGACGGGCTCTCGTTTGTAACAAAGAAGGTTTCAGAATGCCTGACAAGCGGGAAAAGATTGTAAGGCAGAGGGCAGAAACAAGGGTTGGTTGCAGGGCAATGATTATGGTGAGGAAATTAAATTCCGGTCTATGGTCTATAACAAAGTTTGTAAAGGAGCACACACATCCTCTGACACCTGGAAGAGGCAGAAGGGACTTCGTTTATGAGCAATATCCGAGTGGACATGACAGAGTTAGAGAACTATCGCAGCAGTTGGCTCTAGAGAAAAAACGATCTGCAACCTATAAAAGGAATCTTGAATTGTTATACGAGTACATCGAGGAGCATAATGAATCCGTTTCAAGGAAGATACAACACATAGTAGAGAGTGTGAAGGAGATGGAAGCCAACGAACAAGAGAGTCTTAGATAG 759 0.4321 MEFEIDDSNNGDAVGNVTTGEVSSSTADKVDCSSFDPTDERDQDDNMTQDSSGVDQIPLAITALSAVRTVDEPYMGQEFVSEAEAHAFYNAYATRVGFVIRVSKLSRSRRDGSVIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKLNSGLWSITKFVKEHTHPLTPGRGRRDFVYEQYPSGHDRVRELSQQLALEKKRSATYKRNLELLYEYIEEHNESVSRKIQHIVESVKEMEANEQESLR* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6643 252 Coils Coil 194 214 - -
Psa5g6643 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 249 - -
Psa5g6643 252 MobiDBLite consensus disorder prediction 33 48 - -
Psa5g6643 252 MobiDBLite consensus disorder prediction 11 32 - -
Psa5g6643 252 MobiDBLite consensus disorder prediction 1 54 - -
Psa5g6643 252 Pfam FAR1 DNA-binding domain 88 174 IPR004330 -
Psa5g6643 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6643 Psa-Chr5 555675090 555679074 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Psa5g6643 FAR1 2e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6643 - - gmx:100806900 371.703