Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6642 ATGGGGTTCTTAAAAAAACAATTCTCAACCTACCTTTTGAATACTATACTATTTGAGGTGGTTGTTTTTTCATGGCTATGGTTACATGTTACATGTCTTGGTTCCATGTCATCGATTGCTGTGTCTTATGGAGATAAAGGTTCAGCTTTCTGTGGCTTGAAATCTGATGGATCTCATACTGTGACATGTTATGGATTCAATTCGGCTATAGTTTATGGAACACCGTCTCATTTTCCGTTCATCGGTTTAACTTCTGGCGATGGTTTTGTTTGCGGACTTTTGATGAGTTCGAACCAACCGTATTGTTGGGGGAGTAGTAGCCATATAGAAATGGGTGTGCCACAACCTATGGTTAAAGGAGCTCAGTATTTAGAAATCAGTGCCGGAGATTATCATGTTTGTGGATTGAGGAAGCCTTTAACAGGAAGATACAGGAACATTTCTTTTGTTGATTGTTGGGGGTACAACATGACGAATAATTACGAGTTTGATGGACAGATTCAATCGATTTCAGCGGGTTCTGAGTTCAATTGTGGACTTTTTTCGCAGAATAGGACGGTTTTTTGTTGGGGTGATGAGGTTAGTAGTCAAGTTATTAGGTTGATTCCTCAAGGGATGAGATTTCAGAAGGTCTCTTGTGGAGGGTATCATGTGTGTGGAATCTTGGAAGGTGTGAATTCTAGAACTGTTTGTTGGGGGAGGAGTTTGGATATGGAGGAAGAGATTTCATTGATTCCTAATCAAGGACAAGGTGGTAGTGTTGAGTTGGCACCAAATGATCCTATGCTTTCTGTTGTTGGAGGAAAGTTTCATGCTTGTGGAATTAAGAGCTATGATCATGGTGTGATTTGTTGGGGTTTGAGTTTGAAAACAAGCACAGAAGTTCCTAAAGAGATTAAAGTGTTTGAAATTGCAGCTGGTAATTATTTTACATGTGGAATTCTTGCTGCGAAATCGCTTGAACCTATTTGTTGGGGTGTTGGATTTCCAACTTCTCTACCTTTGGCTGTTTCACCAAGAACAAGAAAGTGTTTCTCTGAACCTTGTCCTCCAAGTTACTATGAAATTGAAAAGGATCAACAAAAGGGTCTAATTTGTAAGGATTCCAATTCGCACCTTTGTGTTCCATGCAGTGGTGTTTGTCCGGATGAAATGTATGAGAAAAGTGGTTGCAATTCGAAATCTGATATATTGTGTGAATATAATTGTTCGGTTTGTTCTTCGCCAGAATGTTTCTCGAATTGTTCCTCCTCTTCTTCTTATTCCAATGGTGATAATGGGAAGAAAAGTGAAAGATTTTGGTCTATGCAGTTGATAGTTGTTGTTTCTGAGATAGTGTTTGTTGTTTTCATAGTTAGTGTTGTGTCGATAACCGCGGTTATGTATGTTCGTTACAAGCTGAGAGATTGTGAGTGTTCAACAACAGCGTTAAACTCGGCGACGAGACTCAATGTTGGTTCTTCGGTACAAAAGGATAACGGAAAGATTCGACCGGACGGGGAGGAGTTTAAGATAAGGAGAGCTCAGAAGTTCACCTATGAGGAACTCGAAAATGCAACTAGTGGATTCAAAGAAGAATCCATAGTAGGTAAAGGAAGTTTCTCTTGTGTGTTCAAAGGTGTTCTCAAAGATGGAACAGTTGTTGCTGTTAAAAGGGCTATCATGTCACCAAATATGCAGAAAAATTCGAAAGAGTTTCACACAGAACTCGACTTGCTATCGAGGTTGAATCATGCGCATTTGCTCAATCTATTAGGCTATTGCGAAGAAGGCGGTGAAAGATTACTTGTTTATGAGTACATGGCTCATGGATCATTGCATCAACACCTCCATGGCAAAAACAAAGAGTTGAAAGAGCAAATGGATTGGATCAGAAGGGTAACAATCGCGGTCCAAGCCGCGCGAGGAATCGAGATAGCAAATGTTTCATGCAAATGTGTGAGAATGAGAGGTAAAGATAGGCCATCAATGGACAAAGTAACAACAAGTTTGGAAAGAGCATTAGCAATGTTAATGGGAAGTCCTTGTATTGATCAACCAATTCTACCAACAGAAGTTGTTTTAGGAAGTAATAGAATGCATAAGAAAACATCTCAAAGATCGTCGAACCGGTCGGCTTCAGAAACCGACGTGGTCGAAGGCGAAGATCAAAGGTTCGAGTTTAGAGCACCTTCTTGGATTACTTTTCCAAGTGTGACATCTTCTCAAAGACGAAAATCTTCGGAATCAGAAGGCGAAGTTGAAGTGAAGATTGAAGGGAGAAACTTTGTTGGTGGGGGTGATGTTTTGAGAAGCCTTGAAGAAGAGATTGGTCCTGCTTCTCCTCAAGAGAGACTCTTCTTGCAACACAACTTTTGA 2358 0.4029 MGFLKKQFSTYLLNTILFEVVVFSWLWLHVTCLGSMSSIAVSYGDKGSAFCGLKSDGSHTVTCYGFNSAIVYGTPSHFPFIGLTSGDGFVCGLLMSSNQPYCWGSSSHIEMGVPQPMVKGAQYLEISAGDYHVCGLRKPLTGRYRNISFVDCWGYNMTNNYEFDGQIQSISAGSEFNCGLFSQNRTVFCWGDEVSSQVIRLIPQGMRFQKVSCGGYHVCGILEGVNSRTVCWGRSLDMEEEISLIPNQGQGGSVELAPNDPMLSVVGGKFHACGIKSYDHGVICWGLSLKTSTEVPKEIKVFEIAAGNYFTCGILAAKSLEPICWGVGFPTSLPLAVSPRTRKCFSEPCPPSYYEIEKDQQKGLICKDSNSHLCVPCSGVCPDEMYEKSGCNSKSDILCEYNCSVCSSPECFSNCSSSSSYSNGDNGKKSERFWSMQLIVVVSEIVFVVFIVSVVSITAVMYVRYKLRDCECSTTALNSATRLNVGSSVQKDNGKIRPDGEEFKIRRAQKFTYEELENATSGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQHLHGKNKELKEQMDWIRRVTIAVQAARGIEIANVSCKCVRMRGKDRPSMDKVTTSLERALAMLMGSPCIDQPILPTEVVLGSNRMHKKTSQRSSNRSASETDVVEGEDQRFEFRAPSWITFPSVTSSQRRKSSESEGEVEVKIEGRNFVGGGDVLRSLEEEIGPASPQERLFLQHNF* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6642 785 PANTHER RECEPTOR-LIKE KINASE 639 785 - -
Psa5g6642 785 PANTHER RECEPTOR-LIKE KINASE 8 638 - -
Psa5g6642 785 ProSiteProfiles Protein kinase domain profile. 523 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6642 785 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 639 785 - -
Psa5g6642 785 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 8 638 - -
Psa5g6642 785 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 348 399 IPR001368 GO:0005515
Psa5g6642 785 MobiDBLite consensus disorder prediction 692 715 - -
Psa5g6642 785 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Psa5g6642 785 Gene3D Phosphorylase Kinase; domain 1 495 600 - -
Psa5g6642 785 SUPERFAMILY Protein kinase-like (PK-like) 505 638 IPR011009 -
Psa5g6642 785 SUPERFAMILY RCC1/BLIP-II 31 287 IPR009091 -
Psa5g6642 785 Pfam Protein tyrosine and serine/threonine kinase 526 638 IPR001245 GO:0004672|GO:0006468
Psa5g6642 785 Gene3D - 83 375 IPR009091 -
Psa5g6642 785 MobiDBLite consensus disorder prediction 692 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6642 Psa-Chr5 555670690 555674125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6642 613 785 Receptor kinase-like Gene Family AT3G59420 59.195 1.13e-48 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Psa5g6642 PK_Tyr_Ser-Thr 6.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6642 - - gmx:100809215 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4919 7 430388862 430391927 Psa5g6642 5 555670690 555674125 PCT