Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6640 ATGCACTTACAAAAAGCATGTCTTATGCAGAGTTTGTTTCCTTTGCAAACCGAGTTTCAGAGAAAGGAACCTAAAGAACTAGCTGAATTGCCCGGCGTGGAATTTCCCGATTTGCCTACTTTGAATAACTATTTAAAGCACTGGGGAACTCATCGAGTCACTCAAGACAGAACCCTTTATAGTTGGATAAATGAAGAAGGGATAGTGATAGGTAAGAGGACATATAGGGAGCAACATTTAAGAGCTTCTTGCATTGCAAGTAAGCTCTTAAAAAGCCAAAAGCCAGTTATCAAACCTGGAAACAAGGTTCTTCTAGTCTATGTTCCCGGCCTAGATTTCATTGATGCGTTCTTTGGATGCCTAAGAGCTAAAGTTATACCAGTTCCAGTTCTTCCCCCAGATCCCATGCAAAGAGGTGGACAAGCACTTTTAAAAATCGAGAACATTGCTAAATCATGTGGCATAGGGGCAATTTTATCAACAGTAGCTTATCACTCAGCAGTCCGTGCAGGTTTAGTGAAGAACTTCATCACGTTGAAAAATGGGAAATCCTCGGCTCGGTGGCCAAGTCTTCCGTGGCTGCACACTGATACTTGGGTCAATAACTCAAGAAGTTATGCTGTGGAGGATCAATATAATGATCAGTGTGAATCTCAGCCTGGTGATATATGTTTCTTGCAGTTTACTTCAGGCTCGACCGGTGATGCTAAAGGAGTCATGATCACTCATGGAGGACTGATTCACAACGTTAAGCTGATGCAAAGTAGGTACAAGAGCACCTCAAGGACAGTGCTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTCAGCGGTGGAACTGCGCTTCTGTTTTCGCCAATGACATTCATCAAGAAACCACTTTTATGGATAGAAACCATGAGCAAGTATCACGCAACTCACAGTGCTGGACCTAACTTTGCTTTTGAGTTAGTCGTCCGAAGATTAGAGTCTACTGATAAGGATAAACTTCAGAATCTAGACCTTTCATCCATGATTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACATTGAAAAGATTTCTTGAGCTAACCAGTCCTTATGGCTTGTCTCAGAAGGCGATGGCTCCGGGATATGGCTTAGCAGAGAATTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGCAATCCTATACTTGTTGACTGGCAAGGACGAGTTTGTTGTGGATATGTTCATCCAGGGAATGCCGACATTGACATCAGAATAGTTGATCCAGATGGCAGTGAAGAGCTTCAGGAAGATGGAAAGGAAGGTGAAATCTGGATCAGTAGTCCAAGTGCAGGAATAGGATACTGGGGGAAGGAAGAATTGAGTCAGAAAACTTTTCAAAATCAGCTTCCGAACCATCCTGGACGTGTCTACACAAGAACTGGAGACTTGGGAAGGGTAATAGACGGAAAACTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAATATCTATTCCTCAGATGTTGAAAAGACAGTCGAAAATTCGTCTGAATTTCTTCGTCCGGGATGCTGTGCTGTCATTGGTGTCCCTGAAGAAACTTTATCGGCAAAAGGGATTTCCTTGCCGGATGGTTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAATTAAGGGATGGAAAACCAGTTAGCAAAGATGTGGTTGAAGATATTCAGGCACGCGTGGCCGAAGAACATGGAGTCAATGTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATTAAAAGATTTGAATGTCTCAAACAGTTTGCAGATGGAACGCTGAATTTGGTACCACAACCTGTTCTGACAAAGAAAACACTGGTAAGGTCATTCACTACAGGAACGTGTCAAGAAGGAAGAACACCCCGGGCGCGGCTAGCAAATAGTACACCTTTAACCAGTCCAAGAATCACAACTCAAAAACTCTCAGATTTCCTCGGAGTTCCAGTTGCAGCTATAGACGTTTTCAGTGCATCCTGCATTCAAGAATTGGCCAACTTCTCAGAGAATCTTCTGTTGAAGTCTCAACCTCACCATATGAACAATCCATCCTATGCTCCAGAAGATGAAACCGAATCTACTGAATTTGTCGTGGATGTGTCCAAGTCTCATCAATGGAGTATATATGCACTTCAAACCTTAGCACTTGTTTTCATTTCTACCCTTTTGGTTTCTCCTGCTTATCTATCCATCACTACTTTTCAAAGTCTCATTGCAAGTGTTGATAAGTCAGCGTGCGGAATTCCTTGGTCAAACTATCTAGTTTCACTTGCTTTGGCTCCACTTTCTTGGATCCTTTGCATTGCTTCTACATGCATTTGCATTTCATTTTTCGGAAACTCTTTCTTGAGGCCAAATTATGCTCTTACTCCTGAAATATCCATATATTCAATGGCCTTTGTCAAGTGGTGGGCACTTTATAAAAGTCAGGACATTTCATCGAAAGTTCTAGCCACACACCTCAAAGGAACAGTGTTTCTGAAGTACTGGTTTGAGATACTCGGTGCAAGAATCGGATCCTCAGTTTTGCTTGACACGGTTGACATCACAGACCCGTCGCTGGTTTCAATTGGAGATGAAGCTGTCATTTCTGAAGGGGTTCTGGTTCAAAGCCATGAGGTTAAGAACGGAATTCTAAGTCTCCATCCTATTAGGATCGGCCGGAATTCTTCCATTGGACCTTATGCTGTTATTCAAAAAGGAAGTGTTGTTAAAGAAGGAGCTGAGATACAACCACTACAAAAGGTTGAAGGAGGCCAACATGTGCTCAAACCTACAAAGCTTAATAATGTTAAAGAGAATGCAGTGTTGCTTGTTACTACCAACAAAACTGAGTCTGAAGCTATATACCATTTTCTGGGGATTTATCTTGTTGGCTTTGTTAGTTCCCTTGCTGCAGCTATTACTTACTTCATGTATACATGGTTCTTCCAAAAACCTGTTTCATTCCAAGGCTTTTCATTTGTATGCATATGTGGAGCCTTCCATTGGATACCATTCACTATTACTGCATATGCTACAATGTTTTCTAATGTACCATCAAATCCCATTGCCTTTTCCATTTCATTTACATGTGCATACTTGCTTCATGGTCTCATACTAACCTCTCTCACCTGTTCTTTGACTCGTTTACTGAAAAGTCAAAATCAAACTCACTTCAAAACTTGGCTTCAAAACCAATTGACCCTTTCCTGCCACCTGAGATTTACAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCGTATACTTACGCCTTCTAGGTGCCAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAATCCAGTTTCAAACCCTGAGCTAATGTCAATTGGTGATGGTGTTCATCTTGGTGACTTTAGCCGCATAATCACTGGTTTCAACTATTCCAATGGATATGCTTGTGGAAAAATAGAGGTTCAAGATAACTCAGTTGTAGGTAGTCAAAGCCTAATTCTCCCTGGTTCTCTTGTTGAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGAATTCTATACTCCATGAAGGTAGTGTTTACATCGGGTCTCAAACCCGAGTTACAATGAGGAACTCGGGAAATGCTAATTTTGATGAAAGAATAGAGGAGATGGACATGGACTACAAGAAAATAGTTGCAAATTTGGCTGCAAATTTAGCTGCAACAACTATGAATGCTAAAGCAAGATATTTCCATCGCATCGGTGTTGGTGGAAAAGGGCAATTGAAAATATACAACAAACTTGAAGGTGTTCCAATGCACAAGATTTTTCACCCTGGAAAAAGCTACCCCATCTTAGTAAGACATAGTAATAGCTTGAGTGCTGATGATGATGCAAGAATCGACGCACGAGGTGCGGCATTGAGGATACTTTCTGAAGATGAACCTCCTACAGGCTCTTCTGATTCTCCTCCTCCTTATACTCTCATTGACTTAACACTAAAAACAGGAAATGCGTTTTATGCTCGAACACTCTCTGATTTTGCAAGCTGGCTTGTGTGCGGACTTGCTGCAAGGGAAGAACTGGTAAAGGGTGCTCCACATGTTCGTGAAGCAGTATGGAGTTCCCTTAGACATGCTGATTCATATGCCGAATTGCATTACTACTCAAACTATTGCAGGCTCATGCGGTTCGAAGACGGACAACAAATGTATGTGAAATTCAAGTTAAGGCCATATGACACAAGCATCAATGAAGACAGAGGCAAAGTTATTCCAACAGGGATTCTTCCACCAGAGACAGGTGCAATTCCTAGAGACGAAAATGATTCACGTCCTTTGCTTTTCCTTGCTAATGATTTTCAAAGCCGTGTTAGTTCCTCCAATGGAGTTTGTTATGTTTTCCAAATTCAACTAAGACCCGTTCCAGACGACGAACAAGCCCGCGAGATTGCATTGGATTGTTCTAAACCATGGGATGAAAATCAATTCCCTTTCATTGACGTTGGAGAGATAAACATCAATGAGAATCTTTCAATGGAAGAATCACAGAAGCTCGAGTTCAATCCATATCTTAAAAGCAATGATTTGGATGTAATTTCAGCCACTTCCAACACACAAAGTGCTTCAATTGATCATGGCCGTTCACTAATCTATGAGATCTGTCAGCATGTCCGTAACAGACAACCGCTCCCAGAAGCATGGAGAAACCTCGTACAACAATCCAATGTTAAGGTTGACTTGTCCTGCTGTCCAATAGCATCATCACCACCAGCATTGCCTGAAAAAGAACCATTACTGAAAAACAAAACTCAACCGAAATTAACATTAACAAGAACATGGTATCAAACATTCTCAGCACTCTTCATTCAGCCATTTCTACAAACAGCTTTACCTCACATGGTAATCGGTCTATCCATTTTCTTTCCTCTGAACATGGTTGTTTATTTTAAGGAAACCAAGAAACTCCCACTCCATTGGCTACTTCCATTCTTCTGGATTCTCTCAGGTTTCACAGCTGCATTATCATGTACCATAGCAAAAAGGGTTCTTGTAGGAAAAAGAAAAAACGGCGAAACAATACCAATATGGAGCAAAAGAATCATAATGGACACAACATGGCAAGCTATTAGAACACTAGTTGGTGATTACTTCATGGATATGACAAATGGGTCGTTTTTATTTGTGATATGGATGAAAATGATGGGTGCAGAGATTGAAATTGATGGCGGTAGTTACGTGGATAGCAATGGAGCAATGTTGAATCCTGAAATGGTGAAGATTGAGAGAGGTGGTTGTGTGGGAAGAGAGGCATTGTTGTTTGGACATATATATGAAGGTGAAGAAGGTGGAATGGTGAAATATGGAGAGATTAAGATTGGGGAAGATGGGTTTGTGGGAAGTAGAAGTGTGGTTATGCCTGGTGTGGAAGTTGAGAGTGATGGAAATCTTGGTGCTTTGTGTCTTGCTATGAAAGGTGAAGTTATTAGGTCAAGATAG 5526 0.4142 MHLQKACLMQSLFPLQTEFQRKEPKELAELPGVEFPDLPTLNNYLKHWGTHRVTQDRTLYSWINEEGIVIGKRTYREQHLRASCIASKLLKSQKPVIKPGNKVLLVYVPGLDFIDAFFGCLRAKVIPVPVLPPDPMQRGGQALLKIENIAKSCGIGAILSTVAYHSAVRAGLVKNFITLKNGKSSARWPSLPWLHTDTWVNNSRSYAVEDQYNDQCESQPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMQSRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGTALLFSPMTFIKKPLLWIETMSKYHATHSAGPNFAFELVVRRLESTDKDKLQNLDLSSMIFLMVAAEPVRQKTLKRFLELTSPYGLSQKAMAPGYGLAENCVFVSCAFGEGNPILVDWQGRVCCGYVHPGNADIDIRIVDPDGSEELQEDGKEGEIWISSPSAGIGYWGKEELSQKTFQNQLPNHPGRVYTRTGDLGRVIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVENSSEFLRPGCCAVIGVPEETLSAKGISLPDGSDQVGLVVIAELRDGKPVSKDVVEDIQARVAEEHGVNVASVKLIKPRTISKTTSGKIKRFECLKQFADGTLNLVPQPVLTKKTLVRSFTTGTCQEGRTPRARLANSTPLTSPRITTQKLSDFLGVPVAAIDVFSASCIQELANFSENLLLKSQPHHMNNPSYAPEDETESTEFVVDVSKSHQWSIYALQTLALVFISTLLVSPAYLSITTFQSLIASVDKSACGIPWSNYLVSLALAPLSWILCIASTCICISFFGNSFLRPNYALTPEISIYSMAFVKWWALYKSQDISSKVLATHLKGTVFLKYWFEILGARIGSSVLLDTVDITDPSLVSIGDEAVISEGVLVQSHEVKNGILSLHPIRIGRNSSIGPYAVIQKGSVVKEGAEIQPLQKVEGGQHVLKPTKLNNVKENAVLLVTTNKTESEAIYHFLGIYLVGFVSSLAAAITYFMYTWFFQKPVSFQGFSFVCICGAFHWIPFTITAYATMFSNVPSNPIAFSISFTCAYLLHGLILTSLTCSLTRLLKSQNQTHFKTWLQNQLTLSCHLRFTKLLSGTEAFCVYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRIITGFNYSNGYACGKIEVQDNSVVGSQSLILPGSLVEKNVILGALSVAPMNSILHEGSVYIGSQTRVTMRNSGNANFDERIEEMDMDYKKIVANLAANLAATTMNAKARYFHRIGVGGKGQLKIYNKLEGVPMHKIFHPGKSYPILVRHSNSLSADDDARIDARGAALRILSEDEPPTGSSDSPPPYTLIDLTLKTGNAFYARTLSDFASWLVCGLAAREELVKGAPHVREAVWSSLRHADSYAELHYYSNYCRLMRFEDGQQMYVKFKLRPYDTSINEDRGKVIPTGILPPETGAIPRDENDSRPLLFLANDFQSRVSSSNGVCYVFQIQLRPVPDDEQAREIALDCSKPWDENQFPFIDVGEININENLSMEESQKLEFNPYLKSNDLDVISATSNTQSASIDHGRSLIYEICQHVRNRQPLPEAWRNLVQQSNVKVDLSCCPIASSPPALPEKEPLLKNKTQPKLTLTRTWYQTFSALFIQPFLQTALPHMVIGLSIFFPLNMVVYFKETKKLPLHWLLPFFWILSGFTAALSCTIAKRVLVGKRKNGETIPIWSKRIIMDTTWQAIRTLVGDYFMDMTNGSFLFVIWMKMMGAEIEIDGGSYVDSNGAMLNPEMVKIERGGCVGREALLFGHIYEGEEGGMVKYGEIKIGEDGFVGSRSVVMPGVEVESDGNLGALCLAMKGEVIRSR* 1842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6640 1841 PANTHER AMINE OXIDASE 8 664 - -
Psa5g6640 1841 PANTHER AMINE OXIDASE 666 1841 - -
Psa5g6640 1841 Gene3D Hexapeptide repeat proteins 1709 1834 - -
Psa5g6640 1841 SUPERFAMILY Trimeric LpxA-like enzymes 1698 1834 IPR011004 -
Psa5g6640 1841 SUPERFAMILY Heme-dependent catalase-like 1192 1569 IPR020835 GO:0020037
Psa5g6640 1841 Pfam AMP-binding enzyme 72 505 IPR000873 -
Psa5g6640 1841 Gene3D - 27 499 IPR042099 -
Psa5g6640 1841 CDD FAAL 52 619 IPR040097 GO:0008610
Psa5g6640 1841 ProSitePatterns Putative AMP-binding domain signature. 226 237 IPR020845 -
Psa5g6640 1841 Gene3D Hexapeptide repeat proteins 1096 1214 - -
Psa5g6640 1841 ProSiteProfiles catalase family profile. 1188 1841 IPR018028 GO:0004096|GO:0006979|GO:0020037
Psa5g6640 1841 PANTHER AMP-BINDING ENZYME 666 1841 - -
Psa5g6640 1841 PANTHER AMP-BINDING ENZYME 8 664 - -
Psa5g6640 1841 Gene3D Catalase core domain 1215 1577 - -
Psa5g6640 1841 Gene3D - 500 628 IPR045851 -
Psa5g6640 1841 SUPERFAMILY Trimeric LpxA-like enzymes 849 947 IPR011004 -
Psa5g6640 1841 SUPERFAMILY Trimeric LpxA-like enzymes 1111 1217 IPR011004 -
Psa5g6640 1841 Gene3D Hexapeptide repeat proteins 862 966 - -
Psa5g6640 1841 SUPERFAMILY Acetyl-CoA synthetase-like 40 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6640 Psa-Chr5 555352370 555360162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6640 222 538 Monolignol Biosynthesis Gene Families AT1G20480 26.730 6.64e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6640 - - cam:101501314 3238.36