Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6532 ATGGGAAACCAGATGATTAATTCAGAGAAATCGAGTGTTGGAATTCAGAAGGTTAATCAAGGATGTGTTTGGAGCTGGTTTCATATTCTTGATTACCATCATTGGGGTGTCAAAAGGGCTTTTCGTCACAAAAAGAAAAGAAATGTCAAAAATAAGAGAAAGTCCACTTTGCAAGACCAACAAAATGCAGTTACAGAAGCAGAAGCAGAAGCAGAATCTTCCTTGGTCAGTCAACATAGAGAAACATCGAATGCACTTCATCAGAAGAAAGGTGGAAATACAGCGGAAAGTTTCCTTAACAGAAACATTTCAATTAAATTCAAGAACAATGATGATGTTTTGGAGATAGTTAGTATGGAGAAGAATTTATTACTCAAGTTTCTGAAAGATATCGACTTCGTCCGTAAAAAAAATCGTCAAGCTTCTTACAACAAAGCAAGATTGACAAAATCAGGAACCTTTCCTTTAGCCGCGTCTTCCAAGACGAAAAACATTAGCTCTAGTACCTTGCGATCCAAGCAAGTCGAAATCTGGAACTTCCGCAAAGGAGAAAGTTTTCTCGTTGGAACTCAGGCACCGAAAAAGTTTGGATCCAATTCAGTGAATGATGTTTCTTATGAAACGCAGAAGTCTTCCGCGAGTCATAAAACCGATAGTGCCGTGGAAAAAAATGCAAGCGTTTCTTCGAGGCTTTCTGAAGGGTTAAACCACAAAGGGTGGAATCAAATGGTTCTTCATCAGTTCAAAGTTATAAAACAGAAGATCAAACAAGCAGTCGTTGAACTCAAAAAAAGCGGTCACCAAACATCAGTTCAACCTATCCACAACAATGAGAAAGAGATCTCGGAAAGCGTAGACGATGGCGCGATTCAAGAATACAAAATAAGTAGAAGCTTGAATGAGACTAAGGCTTCTGATTCTGATTCTGATTTTGATTCCAACAAACGTGAAGTTCGCCTGATGAAAAGAACGTCCTCTCTTAACGAGTCGATGGATAGATATACTCAGTTGTTTGAGAAAAGCTTAAGCAAAGAAATCAAGTGGAAAAGCTCAAAGTCTAAAAGCTTAAAATTGACAAATGATATCGATAGCAAGATTCACAAGAGTAGGCATGCTCCTAGGTTTTCGAGAAGCAATTGTTCTATGCCGAATCTCGAGTCTTTAGAATTCATTCTACAAGAAGCTCTTCTTGACACAAATGATATAGGAAATAATGCAGTCGAAAGTGATAACGACACCGGAACTGATGAAACAGTTGAAGGGAGTAGCAGAGTTGTGAATGCTAGTCATTTATGGAATAAGATAGTGGAGAAAATTGAAGGAGTTACCTATGACCGAAGCGATGAAAATTTTCCTCGAGAAAATATGGAAATAAGCATGACGAATACTTATCTTAGCAAGGAAGTAACAACATCACTTGAAACTAGCTTTCAAGATAGTACAATCAACCAAGCAGAAGGAAAAGAATCGAATACACGACGGCGCTCAAATGCTAGCGAAACTGCCGAAGAGACTAACAAGAGTCTTGAAAATCATTTTCTGTACTTGAAATCATATTCAGAAAACGACTCCAATTTCAAATATGTGAAAGATATTCTTGAATACTCCGGTTTCATAGGAAACGAGCAGATTCAAACGCGATACACGGTAGACCAGCCAATAAAACCGTCCTTATTCATAGCACTAGAGGAATCATTGCTTCATGAAAATGAGTATTCTGCAGAAGAGAATAACAGCATGTTTGATCACCAGCTTCTTTTCAACTTGATTAACGAGACACTCTTTCAAATATATGAAAAGTCGCCAGCATACTTTCCGAGACCTTTCGCCTTCAACCATTGGCTAAAACCAATGCCAAAAGGAAATTACATTGTTAAAGAAGTATGGGATAATGTTAGTTCATATTTGAGTTTGAGACCAGAGTTAGACCAGACATTAGAAGATGTTGTTGGTCGTGATTTAATGAAAAGAAGTGGTGGTTGGATGAATCTTCAACAGGATGAGGAGTGTGTAGCACTGGATTTGGAGGAAATGATCATAGATGATTTATTAGATGAAATTATGTTCTCTTGA 2073 0.3782 MGNQMINSEKSSVGIQKVNQGCVWSWFHILDYHHWGVKRAFRHKKKRNVKNKRKSTLQDQQNAVTEAEAEAESSLVSQHRETSNALHQKKGGNTAESFLNRNISIKFKNNDDVLEIVSMEKNLLLKFLKDIDFVRKKNRQASYNKARLTKSGTFPLAASSKTKNISSSTLRSKQVEIWNFRKGESFLVGTQAPKKFGSNSVNDVSYETQKSSASHKTDSAVEKNASVSSRLSEGLNHKGWNQMVLHQFKVIKQKIKQAVVELKKSGHQTSVQPIHNNEKEISESVDDGAIQEYKISRSLNETKASDSDSDFDSNKREVRLMKRTSSLNESMDRYTQLFEKSLSKEIKWKSSKSKSLKLTNDIDSKIHKSRHAPRFSRSNCSMPNLESLEFILQEALLDTNDIGNNAVESDNDTGTDETVEGSSRVVNASHLWNKIVEKIEGVTYDRSDENFPRENMEISMTNTYLSKEVTTSLETSFQDSTINQAEGKESNTRRRSNASETAEETNKSLENHFLYLKSYSENDSNFKYVKDILEYSGFIGNEQIQTRYTVDQPIKPSLFIALEESLLHENEYSAEENNSMFDHQLLFNLINETLFQIYEKSPAYFPRPFAFNHWLKPMPKGNYIVKEVWDNVSSYLSLRPELDQTLEDVVGRDLMKRSGGWMNLQQDEECVALDLEEMIIDDLLDEIMFS* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6532 690 MobiDBLite consensus disorder prediction 475 505 - -
Psa5g6532 690 MobiDBLite consensus disorder prediction 488 505 - -
Psa5g6532 690 Pfam Domain of unknown function (DUF4378) 526 686 IPR025486 -
Psa5g6532 690 MobiDBLite consensus disorder prediction 45 93 - -
Psa5g6532 690 Coils Coil 50 70 - -
Psa5g6532 690 PANTHER PROTEIN TRM32 1 89 IPR044257 -
Psa5g6532 690 PANTHER PROTEIN TRM32 72 690 IPR044257 -
Psa5g6532 690 PANTHER PROTEIN TRM32 72 690 - -
Psa5g6532 690 PANTHER PROTEIN TRM32 1 89 - -
Psa5g6532 690 MobiDBLite consensus disorder prediction 55 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6532 Psa-Chr5 551187377 551191292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6532 112 680 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 26.936 9.02e-42 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6532 - - mtr:MTR_2g096870 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6532 5 551187377 551191292 Psa5g6532 5 551187377 551191292 ECH