Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6507 ATGCCAAAACCTAGAAGCTTCTTTTTCTTCAAACCATCACCTCCCAAATCACCACCACAATTGCCACCTTCCTCGCCTCTCAACAAAACCTTTTCCGATGCAATAGTTGACGAAAACATTGAAACCGCACACTCTCTCATAACCAAATGGAACTCTATTTCCACATCTTCTAACCATTCTTATTCTCTTTTCACAAACTCTCCTCATGAAGCTAAACAGTATCTTAACGCTGTTAAGAGGTTACAATATGCTATGATGTACCTCATCGCACGTGATTCCACCTCCGAGAAACTCATCAAAGCACAATCGTTGATGAAACTCGCCATGAAGAAACTCGAAACAGAATTTTACGGAATATTAGCACAAAACAGAAACCGTTACGGCTCGAAATCACTCTCGGTTGAATCAACCGTCGATCACCGGAGAAGTTTCTCCGAAATCGACGATAAATTTGACGAGGAGACATCGCTAACTGCCGAATCGGATTTGAAATCAATTGCAGAATGTATGATCTTCACCGGTTACAGTAAAGAGTGTGCAAATGTTTACGTGATTGTGAGAAAATCGATAATGGATGAAGCACTATACAATCTCGGAGTTGAGAAGCTGAGTTTCTCTCAGGTTCAGAAAATGGATTGGGAATTGCTGGAATGGAAGATCAAGTGTTGGTTGAACGCCGTTAAAGTTGCCATTAATACTCTTTTTCTCGGCGAGAGAATACTCTGCAATTACATATTTGATATACCAGAGAGGAATATTGCATATTCATGTTTCACTGAGATTTGTAAAGAAGGCGCTATAATGTTGTTTGGATTCCCGGAAAACGTTGCAAAGTGTAAGAATACGCCGGAGAAAATGTTCAGAATACTGGATTTGTATGAAGCAATCTCCGAAAACTGGCAACAAATTGAATCACTATTTGCATCGGAGACATCTTCGCCGATTTGTGCTCAGGTGATCGCTTCAGAGTTGAGGCTCGGTGAATCCGTTAGAACAATGCTATCGGATTTTGAATCGGCGATCCAGAAGGAAACTTCAAAGATTCCGGTACCAGGCGGAGGAATTCATCCTCTCACGCGCTATGCCATGAACTACATTTCGCTTCTCAACGATTACAGCGACGCGCTCTCTGATATATTCTCCGATTGGCCACAAACACCGTTACCGGAATCTTACTACAAAAGTCCGTCTCACGACGAGGATAATCCACCGTCGGAGATATCAAAACGTCTCTCATGGTTGATTCTCTCAGTTCTCTGCAAACTCGACGGAAAATCGGAACTATACAAAGACATTGCGCTTTCTTATCTTTTTCTCGCGAATAACATGCAATACGTCGTCGTCAAAGTGCGTAACTCGAATCTAGGGTTTATTCTCGGCGAGGATTGGTTAATCAAGCATGAGATGAAGGTGAAGGAGTATGTTTCCAAATACGAGCGCATGGCGTGGAGCAAAGTCCTATCGTCGATTCCGGAGAATCCAACGGCGGAGAATGCGAGTGTTATTTTCCAGAATTTCAACGCCGCATTCGAAGAAGCGTGCAGAGCACAGTGTTTATGGGTCGTACCCGACCCGAAATTGCGAGACGAATTAAAAGCGTCAATAGAGTTGAAGGTTGTTTATAAGTATAAAGAATTTTACATGAAATATCGGGTCGGGTTGGATTCGGTGATTAGATATTCGCCCGAAGATTTGAGGGACTATCTATCGGAAATTTTGTGTGGTAGTGTTTTGTCGCATTCTGCTGACCACTTCAAAGTTTGGTGA 1767 0.425 MPKPRSFFFFKPSPPKSPPQLPPSSPLNKTFSDAIVDENIETAHSLITKWNSISTSSNHSYSLFTNSPHEAKQYLNAVKRLQYAMMYLIARDSTSEKLIKAQSLMKLAMKKLETEFYGILAQNRNRYGSKSLSVESTVDHRRSFSEIDDKFDEETSLTAESDLKSIAECMIFTGYSKECANVYVIVRKSIMDEALYNLGVEKLSFSQVQKMDWELLEWKIKCWLNAVKVAINTLFLGERILCNYIFDIPERNIAYSCFTEICKEGAIMLFGFPENVAKCKNTPEKMFRILDLYEAISENWQQIESLFASETSSPICAQVIASELRLGESVRTMLSDFESAIQKETSKIPVPGGGIHPLTRYAMNYISLLNDYSDALSDIFSDWPQTPLPESYYKSPSHDEDNPPSEISKRLSWLILSVLCKLDGKSELYKDIALSYLFLANNMQYVVVKVRNSNLGFILGEDWLIKHEMKVKEYVSKYERMAWSKVLSSIPENPTAENASVIFQNFNAAFEEACRAQCLWVVPDPKLRDELKASIELKVVYKYKEFYMKYRVGLDSVIRYSPEDLRDYLSEILCGSVLSHSADHFKVW* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6507 588 Pfam Exo70 exocyst complex subunit 222 571 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa5g6507 588 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 3 578 - -
Psa5g6507 588 SUPERFAMILY Cullin repeat-like 58 572 IPR016159 -
Psa5g6507 588 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 578 IPR004140 GO:0000145|GO:0006887
Psa5g6507 588 Gene3D Exocyst complex component Exo70 51 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6507 Psa-Chr5 549220702 549223213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6507 9 576 EXO70 exocyst subunit family AT5G59730 47.595 2.51e-180 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6507 K07195 - gmx:100801773 684.871