Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6444 GTTATCATAACAATCCACAGGCCACAAGATTGACTATAGATCAAAAAGGGTGGGTTCATACAGGAGATCTTGGATATTTTGATGAGGATGGCCATCTTTTTGTCGTTGATCGCCTCAAAGAGCTGATCAAGTATAAAGGTTTCCAGGTCGCACCAGCAGAACTTGAAGGGCTTCTTATCTCTCATCCAGAAATACTTGATGCTGTCGTCATTCCATATCCTGACGCCGAAGCTGGTGAGGTTCCGGTTGCCTATGTTGTGCGATCACCGAATAGTTCTTTGACAGAGGAAGATATTAAAAAATTTATTGCTAATCAGGTAGCACCTTTCAAAAGATTGCGAAGGGTTACATTCATCAACACTGTTCCGAAAACAGCATCAGGAAAAATTCTAAGAAGAGAGCTTATTGACAAAGCACGATCCAAAATATAA 431 0.4084 YHNNPQATRLTIDQKGWVHTGDLGYFDEDGHLFVVDRLKELIKYKGFQVAPAELEGLLISHPEILDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEEDIKKFIANQVAPFKRLRRVTFINTVPKTASGKILRRELIDKARSKI* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6444 142 Pfam AMP-binding enzyme 1 44 IPR000873 -
Psa5g6444 142 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 141 - -
Psa5g6444 142 Pfam AMP-binding enzyme C-terminal domain 53 128 IPR025110 -
Psa5g6444 142 Gene3D - 40 141 IPR045851 -
Psa5g6444 142 SUPERFAMILY Acetyl-CoA synthetase-like 1 140 - -
Psa5g6444 142 Gene3D - 1 39 IPR042099 -
Psa5g6444 142 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6444 Psa-Chr5 546207863 546208750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6444 1 142 Monolignol Biosynthesis Gene Families AT4G05160 78.873 1.15e-80 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6444 K01904 - gmx:100797843 265.774