Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6429 AAAAAAGCTAGGGTTCAACAAGCTACAACTCAAACAACCTTCAAGGTTAGGAAGGAGAAATTAGGTGACAAGATTACTGCCCTTCATCAGCCTATTTCCATATTTGTAAAGACTGACACGACCTCTTTCTCGTTAGAAGCTATTGTTTATATCAGATTCCTTCAGACACAAATTGAGGCTCTTAGCTTACCATATTTGAGCAATGGACCTGGAAACACAAGACAACCACATTCAGTTCAAGGAGATAAGAATTGTTTATTTCCTGAAGATCCTGGTCAGTTGCTACATAAAAATAGCTTGAAGAGGAAAGCAACTGAAGAGTTTTCTCATGAAGAACCAAACAAGGACTTAAAAAGTAGAGGGTTGCGTCTTGTTCCAGCGTCATGCACAACTTATCTTAGATGCAACAAGGAGCAGGTCCAACAGGCGAGTGAGCGCACCAGAGTGGAATCGATTGACGAAGAGCGAAAGATCCAAGCGTCACCTTTCCCTTCACCATTGATCTTGTCGCGACCGATAGGTCCCCCCTTGCCTCACGTTGTGGGTTCTCGATTCAACCTCGACCGATAA 570 0.4316 KKARVQQATTQTTFKVRKEKLGDKITALHQPISIFVKTDTTSFSLEAIVYIRFLQTQIEALSLPYLSNGPGNTRQPHSVQGDKNCLFPEDPGQLLHKNSLKRKATEEFSHEEPNKDLKSRGLRLVPASCTTYLRCNKEQVQQASERTRVESIDEERKIQASPFPSPLILSRPIGPPLPHVVGSRFNLDR* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6429 189 PANTHER OS05G0228400 PROTEIN 1 134 - -
Psa5g6429 189 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 134 - -
Psa5g6429 189 CDD bHLH_AtbHLH_like 13 62 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6429 Psa-Chr5 545256522 545257897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6429 1 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 59.375 4.36e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6429 - - gmx:100785156 186.037