Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6418 ATGTGCAAAACCAAAATGGCCATTAACGCTTCTACCCCAAAATCAACCCCACGTTCACAACAACGAACAAACCAAACACCAAAAATAACATCATCATCATCCTCAAAAACATCATCATCAAACCCCACAAAACCCAAAACACCTTCTTTCTCCGACCACCCTTCAACCTCCTACGCCACCACAAGCGGCTCCACCGGCTTCCATCTCTCAACCGACACATCCATCTCAAGCCCAACATCTCTCACCAAATTCCGCAACACACTCCCAGAAAATCCCAACATCTACGACTTCTCCGAAATCTGTTCCGCCACAAACAACTTCCTCTCCAAACGCTACTCTTCCTCCACCCCTTGCTGGCACTGTACACTCCGTGGCGCTGACGTCATCATCTTCCAACGCAAATTCCGACGCAAACTCCAAACCTCCCAGCTTCGCCAACTGCTCTCCGTCGTCTGCCGTAGCCACCACATCAGCATCGTCAAACTCCTCGGCGTTTCAATCTCCGGCGAACATATTTACCTCGTATACGAATTCGTTAACGGAGCTAACCTCTCCGATTGTTTACGTAACAACAAAAACGTTCATTTCACCGTTCTTTCTACATGGATTTCGAGAATGCAAGTCGCGACCGATCTCGCTCATGGACTTGATTACATTCACAGTAAAACCGGTTTGAATTTCAATTTCGTTCATAATCATATCAAGAGTAGCGCAATTGTTGTTACCGAACCTGATTTCAACGCTAGGGTTTGTCATTTCGGTGCGGCTCAGCTCTGCGGTGAAGCCGTTGAGGAAAACGAAATCGCCACCAAACAATTGGGGGAAAACGAAATCACGGAGGAACCTAGATCCAAGGAGTTCAGAAGCTCCAACGTGCAGTTCGAAGGTGTTAGGGGTTACATGTCGCCGGAGTTTCAGTCTACCGGCGTGGCGACGCAGAAGTCTGATGTGTATGCTTTTGGTGTGGTGATTCTGGAGCTTTTGTCCGGTGAGGAACCGTTGAAGTTTAAGTTTGACGAGAAGAGCCGTGATTTTGTGAGGAAATCGGTGATTGAGTCGGCGAGAGCCGCCGTGGACGGTGGCGACGGTAGCGTAGAAGGGAAGCTGAGGATGTGGGTGGATAGGAGGTTGAAAGATTCGTTTCCGGTTGATGATGCTGAGAAGCTGACACGTGTAGCGTTGGATTGTGTACATGTGGACCCTGATCAGAGGCCTAACATGGGACGCGTCGCAGGGAAGATTTCCACTTTGTATTTAAAGTCAAAGAAATGGTCTGATAACATGAAATTGCCTGATATGTCTTTTTCATTGGCTCCTAGATGA 1323 0.4807 MCKTKMAINASTPKSTPRSQQRTNQTPKITSSSSSKTSSSNPTKPKTPSFSDHPSTSYATTSGSTGFHLSTDTSISSPTSLTKFRNTLPENPNIYDFSEICSATNNFLSKRYSSSTPCWHCTLRGADVIIFQRKFRRKLQTSQLRQLLSVVCRSHHISIVKLLGVSISGEHIYLVYEFVNGANLSDCLRNNKNVHFTVLSTWISRMQVATDLAHGLDYIHSKTGLNFNFVHNHIKSSAIVVTEPDFNARVCHFGAAQLCGEAVEENEIATKQLGENEITEEPRSKEFRSSNVQFEGVRGYMSPEFQSTGVATQKSDVYAFGVVILELLSGEEPLKFKFDEKSRDFVRKSVIESARAAVDGGDGSVEGKLRMWVDRRLKDSFPVDDAEKLTRVALDCVHVDPDQRPNMGRVAGKISTLYLKSKKWSDNMKLPDMSFSLAPR* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6418 440 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 440 - -
Psa5g6418 440 MobiDBLite consensus disorder prediction 1 63 - -
Psa5g6418 440 ProSiteProfiles Protein kinase domain profile. 97 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6418 440 MobiDBLite consensus disorder prediction 8 63 - -
Psa5g6418 440 Gene3D Phosphorylase Kinase; domain 1 70 178 - -
Psa5g6418 440 PANTHER OS09G0572100 PROTEIN 1 440 - -
Psa5g6418 440 Gene3D Transferase(Phosphotransferase) domain 1 180 433 - -
Psa5g6418 440 SUPERFAMILY Protein kinase-like (PK-like) 134 410 IPR011009 -
Psa5g6418 440 Pfam Protein kinase domain 137 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6418 Psa-Chr5 544327426 544329626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6418 90 436 Receptor kinase-like Gene Family AT1G51940 30.484 5.24e-40 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa5g6418 Pkinase 2.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6418 - - gmx:100792694 625.165