Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6383 ATGGCAGATTATAGGAGTTTTTCATTTACTAAAATGATTGGCTGCTGGAGTTGCTTCGGGTTGATGAATAAACAACCAAGGCGCAGACGTACTAGACGAAGCATAAAGAATTATCTCTCCCAGGGGCTATTGACGGATGGAGAAACGGAGTGTGATGAGGTATCACATAGTGGTGATTATACTAGTAACAACACGAGTGGAGATGATAGTGAGGTGCAGAATTTACCCAATCGTTCTGAGGATATTTTGAACTTTAGAGCAGAGAATGGCATGATTTGTAGGCCTTTTCCTGCTAAGGAGACTGACAAGCTTGTTCGATCTGAGGATGAAGACGGGAACAAGATGTTAAATGAATATATTCGAGAGTATAAGATAGGTTCTGGTAGCTATGCCAAAGTGGCTCTCTATCAAAGTAGTATTGATGGACGACATTATGCAATTAAGTCCTTTCATAAGTCTCACTTACGAAAGCTTCGAGTTGCCCCATCTGAGACTGCCATGACGGATGTACTACGTGAGGTACTTATCATGAAAATGTTGGAACATCCTAATATCGTTAATCTCATTGAGGTGATTGATGACCCAGAGTCAGATGACTTCTACATGGTACTTGAATATGTGGAAGGAAAATGGGTTTGCGAGGGTTCAGGTCGTCAATGTGCCCTAGGTGAAGAAACCACTAGGAAATACATGCGTGATATAGTCTCGGGATTAACATATCTTCATGGTCATAATATAGTGCATGGGGATATAAAACCTGATAATCTGTTGATTACCCGCAATGGGACTGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGGTAATGATGAACTTCGTCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTAGGTCTTACTTATCACGGCAAAGCTTCGGACACGTGGGCAGTAGGAGTAACTTTGTACTGTATGATATTGGGCGAATACCCATTTCTCGGCGACACACTTCAAGATACATATGACAGAATAGTCAATAATCCCATAGAAATCCCGGACGACATAAACCCGCAGTTAAAGAACTTAATAGAAGGATTGCTTTGCAAAGACCCAGAACAAAGGATGACATTGGCTGAAGTTGCTGAGCATGATTGGGTTATTGGAAATGATGGGCCAATCGGTAAGTACTCGTGTTGGTGCAAACGCAAGAGTCTGGTGATCGAAGACTTTGAGGAGAGCAATGTGGTTGCTTGA 1236 0.4231 MADYRSFSFTKMIGCWSCFGLMNKQPRRRRTRRSIKNYLSQGLLTDGETECDEVSHSGDYTSNNTSGDDSEVQNLPNRSEDILNFRAENGMICRPFPAKETDKLVRSEDEDGNKMLNEYIREYKIGSGSYAKVALYQSSIDGRHYAIKSFHKSHLRKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDDFYMVLEYVEGKWVCEGSGRQCALGEETTRKYMRDIVSGLTYLHGHNIVHGDIKPDNLLITRNGTVKIGDFSVSQAFEDGNDELRRSPGTPVFTAPECCLGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNNPIEIPDDINPQLKNLIEGLLCKDPEQRMTLAEVAEHDWVIGNDGPIGKYSCWCKRKSLVIEDFEESNVVA* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6383 411 Gene3D Transferase(Phosphotransferase) domain 1 217 387 - -
Psa5g6383 411 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 7 408 - -
Psa5g6383 411 MobiDBLite consensus disorder prediction 56 72 - -
Psa5g6383 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Psa5g6383 411 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Psa5g6383 411 Gene3D Phosphorylase Kinase; domain 1 113 216 - -
Psa5g6383 411 ProSiteProfiles Protein kinase domain profile. 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6383 411 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 7 408 - -
Psa5g6383 411 SUPERFAMILY Protein kinase-like (PK-like) 115 386 IPR011009 -
Psa5g6383 411 CDD STKc_LKB1_CaMKK 125 380 - -
Psa5g6383 411 MobiDBLite consensus disorder prediction 49 72 - -
Psa5g6383 411 Pfam Protein kinase domain 121 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6383 411 SMART serkin_6 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6383 Psa-Chr5 541844281 541848888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6383 125 387 CBL-interacting serine-threonine protein kinases AT5G35410 33.840 5.43e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Psa5g6383 Pkinase 9.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6383 K00908 - gmx:100776013 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6383 5 541844281 541848888 Psa5g6383 5 541844281 541848888 ECH