Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6375 ATGACTGTCATCGATGTTCTCTTCCGTGTCGACGCCGTCTGCAAAAAATATGAAAAATACGACATTGATAAACAGCGTGAACTCAACGCTTACGGTGATGACGCCTTCGCCCGTCTCTACGCCGTCGTTGATTCCACCATTCAACAATGCCTCAATAAATCTGAGGCTGCTACCAAAGAGAATAACAGGGCAGCTGCTGCGGCTATGAATGCTGAGGTTCGAAGAGCTAAGGGGAGATTGATGGACGAAATCCCTAAACTGCAGAAACTCGCTAATAAGAAGGCTAAAGGTCTTACAAAGGAAGACATAGCCATTCGTCAAGATCTTGTTCTTGTATTGCCAGAAAGAATCCAAGCAATACCGGATGGTATTACATCGGCGGCTAATCAGACCGGAGGATGGGCCGCTACTTCGTCTCATCCGCATATCAAGTTCGATACACCAGAGGGACATGTTGGAAGTGAATATTTCAATCCTAGTGAAGAATCCAGTCAGTTTCGATCAGAATATGAAATGCGCAAGATGAAACAGGATGAAGGGCTTGATATCATATCAGAAGGATTGGATACTTTGAAGAATCTAGCCCATGATATGAATGAGGAAATGGATCGACAAGTTCCTTTAATGGATGAAATTGACACAAAGGTGGATAGAGCAACAAGTGATGTGAGAAACACTAACTTGCGGCTGAAGAAAACTCTCACCGAGCTGAGGTCAAGTCGAAATTTCTGCATCGACATCACTCTAATGTGCATTCTTCTTGGAATCGTTATGTATTTATACAATGCACTGAAGTGA 798 0.4336 MTVIDVLFRVDAVCKKYEKYDIDKQRELNAYGDDAFARLYAVVDSTIQQCLNKSEAATKENNRAAAAAMNAEVRRAKGRLMDEIPKLQKLANKKAKGLTKEDIAIRQDLVLVLPERIQAIPDGITSAANQTGGWAATSSHPHIKFDTPEGHVGSEYFNPSEESSQFRSEYEMRKMKQDEGLDIISEGLDTLKNLAHDMNEEMDRQVPLMDEIDTKVDRATSDVRNTNLRLKKTLTELRSSRNFCIDITLMCILLGIVMYLYNALK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6375 265 SMART tSNARE_6 166 233 IPR000727 -
Psa5g6375 265 PANTHER SYNTAXIN 1 262 IPR045242 -
Psa5g6375 265 PANTHER SYNTAXIN-72 1 262 - -
Psa5g6375 265 Pfam SNARE domain 208 257 IPR000727 -
Psa5g6375 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Psa5g6375 265 CDD SNARE_Qc 176 232 - -
Psa5g6375 265 SUPERFAMILY SNARE fusion complex 164 232 - -
Psa5g6375 265 Gene3D - 171 232 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6375 1 265 SNARE and Associated Proteins AT3G09740 65.918 6.86e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6375 K08506 - gmx:100817729 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6375 5 541651515 541655236 Psa5g6375 5 541651515 541655236 ECH