Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6360 ATGGAGCGCTTCATTGACAACTTACCGCCGATGGATCTGATGCGATCCGAGAAGATGACTTTCGTTCAACTCATCATCCCGGCCGAGTCCGCTCAGCGTGCCGTCTCCTATTTAGGCGAACTCGGTCTTCTTCAATTCAGAGACTTAAATGCTGACAAAAGCCCTTTCCAGAGAACGTTTGTTAATCAGGTAAAGCGATGTGCTGAAATGTCAAGAAAGCTAAGATTTTTCAAGGATCAAATCAATAAAGCTGGTCTAATGTCATCTTCTCGTACTCTATTGCAACCGGACATTGATTTGGAAGATTTAGAGGTACATCTTGCTGAGCACGAACATGAGCTAATTGAAATGAACTCTAATAGTGACAAACTTCGGCAATCATATAACGAACTTTTGGAGTTCAAGATTGTATTACAGAAGGCATGCAGCTTTCTTATTTCTAGTCACGGTCGTGCTATTTCAGATGAGGTAGAACTACAAGATAATGTGTACTCAAATGGGGACTATGTTGAGACATCATCTTTGCTTGATCAGGAAATGAGACCCGAGCCATCAAATACGTCTAGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGCTCTTAGGTTTGAAAGAATGTTATTTCGTGCTACAAGAGGCAATATGCTTTTCAATCATGCACCAGCTGGCGAACAAATCATGGATCCTGTTTCAACTGAGATGATTGAGAAAACAGTGTTCGTTGTGTTTTTCTCCGGGGAACAGGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATAAGCAAGCATGGGCAAATAACTAGGGAGGTTACATCACGTCTTACTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCACCGGAACAAGGCGCTAGCTTATATTGCAGACCATATAACAAAATGGATGGACCTGGTAAGAAGAGAAAAGGCCGTGTATGATACACTGAACATGTTAAACTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGATGGTGCCCTATGATTGCAAAATCACAGATGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAACTCTCAAGTTGGCATAATCTTCCATCAAATGGATGCAGTGGAATCACCACCGACATATTTTAGGACCAACACTTTCACAAATCCTTATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTGTTGTATTCCCCTTCCTATTTGCTATGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTAGTTCTTATATCACGTGAAAACAAGCTCAGTACACAGAAGCTTGGAAGCTTCATGGAGATGCTATTTGGTGGTCGATATGTGATTCTCTTGATGTCACTATTTTCAATCTATTGTGGGTTAATCTACAACGAGTTCTTTTCTGTTCCTTTTCACATATTTGGTCCATCAGCATTTCAATGCCGGGATACTTCATGCAGGGATGCACATACTATTGGCTTAGTCAAATACCGTGATCCATACCCGTTTGGTGTGGATCCTAGCTGGCGTGGAAGTCGTACAGAATTAGCTTTTTTGAACTCTATGAAGATGAAGATGTCCATCCTGTTTGGTGTGGCACATATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGAAGCTCATTGGATATAAGGTACCAATTTGTGCCACAGATGATCTTCCTCAACAGTCTCTTTGGATATCTTTCCCTTCTCATTATTGTTAAGTGGTGTACTGGCTCTCAAGCAGACCTTTATCATGTGATGATATATATGTTTTTAAGCCCTACAGACGAACTTGGTGAAAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTAGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATACTGAGCGATTTCAAGGCCGTAGTTATGGTATTTTGAATACTTCTGAAATGGATCTTGAGGTGGAACCAGATTCTGCCAGGGAACATCATCATGAAGAGTTCAATTTCAGTGAGGTTTTTGTTCACCAAATGATCCACTCCATCGAGTTTGTTTTAGGTTCAGTTTCTAATACGGCGTCCTATCTTCGACTGTGGGCATTAAGTTTGGCTCACTCCGAACTTTCTACCGTTTTCTATGAAAAAGTGTTGCTTCTTGCTTGGGGGTATGACAATCTCATCATTCGGTTAGTGGGGCTAACAGTTTTTGCCTTTGCAACTGCCTTTATACTACTCATGATGGAGAGTCTCAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAAGCCTTTTTCATTTGCTTCTTTAACGGAAGATGACGATTGA 2463 0.4076 MERFIDNLPPMDLMRSEKMTFVQLIIPAESAQRAVSYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSSRTLLQPDIDLEDLEVHLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACSFLISSHGRAISDEVELQDNVYSNGDYVETSSLLDQEMRPEPSNTSSLRFISGIICKSKALRFERMLFRATRGNMLFNHAPAGEQIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKHGQITREVTSRLTDLEATLDAGIRHRNKALAYIADHITKWMDLVRREKAVYDTLNMLNFDVTKKCLVGEGWCPMIAKSQMQEALQRATFDSNSQVGIIFHQMDAVESPPTYFRTNTFTNPYQEIVDAYGVARYQEANPAVYTTVVFPFLFAMMFGDWGHGICLLLGALVLISRENKLSTQKLGSFMEMLFGGRYVILLMSLFSIYCGLIYNEFFSVPFHIFGPSAFQCRDTSCRDAHTIGLVKYRDPYPFGVDPSWRGSRTELAFLNSMKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDELGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRSYGILNTSEMDLEVEPDSAREHHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLVGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFASLTEDDD* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6360 820 PIRSF ATP6V0A1 9 820 IPR026028 GO:0000220|GO:0046961
Psa5g6360 820 PANTHER VACUOLAR PROTON ATPASE A1 5 820 - -
Psa5g6360 820 Coils Coil 100 127 - -
Psa5g6360 820 PANTHER VACUOLAR PROTON ATPASES 5 820 IPR002490 GO:0033179|GO:0046961|GO:1902600
Psa5g6360 820 Pfam V-type ATPase 116kDa subunit family 37 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6360 Psa-Chr5 539975046 539986058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6360 1 813 Primary Pumps ATPases(2) AT2G28520 80.000 0.0 1357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6360 K02154 - gmx:100776037 1497.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6360 5 539975046 539986058 Psa5g6360 5 539975046 539986058 ECH