Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6317 ATGGCACAATTACCTCCCAAGATTCCAATCATGTCATCCCCAAGTTGGTCAGATTTTTCACCTCATCAAAAAAATAGTATGCCAACCTCCTTTTCAACCAACAACATTGTCTTCAACAACAACGTTAGCACTAACAATTATCATCAGAATCAAAACCCTTCATGGGTGGACGAGTTTCTCGACTTCTCGTCCGCTAGGCGGGGAGCTCACCGTCGGTCTGTGAGTGACTCCGTGGCGTTCTTGGAATTGCCAATGCTCGACGATTGCCGCAGGAAAGATGGTGAAAACAATATTAACGATGATGACAACGAGTTCGACAAGTTTGACGATGAACAGTTTATGTCCATGTTCAATGATGAAATAGCCGGTGTCCATAATATGCAACCGATATTGTCCTCGTCGAACACTTCGAGTCCTTCTGATCAGAATTTTGTCAACAATGAGAATGAGAATGAGAATGAGATGATAAATAAGGAGGAGAAGAAGGAAAATGATTTGAGAGAGATGAAGAAAGAGGAAGATGATGAGAAGCAATTGAAAAATGAACCCGAGGAGGTTGAAAGCCAATGCAACCAGGAAAATTCACAGCCTCAAAATAACAACAACAATGCATCTTCTTCTAACGACAGAATCACCGACCCTAAGAGAGTCAAAAGAATCTTGGCGAATAGGCAATCGGCGCAAAGATCGCGGGTGAGGAAGCTGCAATACATATCAGAGCTTGAACGAAGTGTAACTTCATTGCAGGCTGAAGTTTCAGTGCTTTCTCCACGAGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTTGACAATAGTGCTCTCAAGCAAAGAATTGCAGCTCTTGCTCAAGACAAGATTTTCAAAGATGCACATCAAGAGGCACTGAAAAGGGAGATAGAGAGATTAAGACAAGTATATCACCACCAAAACCTCACAAAGAAGGAAAATGCAACAGGTTCACCTTTACCATCTCCATCACAAAAGCCATTATGTGATCCTCAGTCAGAAAATGAACAACTTCTCAATGGAAACACATGTGCAGCAGTGGCATCAAAAGAAAGGGTGGAAGAAACAGTTGTGTCTGCTTTAACTTAA 1101 0.4169 MAQLPPKIPIMSSPSWSDFSPHQKNSMPTSFSTNNIVFNNNVSTNNYHQNQNPSWVDEFLDFSSARRGAHRRSVSDSVAFLELPMLDDCRRKDGENNINDDDNEFDKFDDEQFMSMFNDEIAGVHNMQPILSSSNTSSPSDQNFVNNENENENEMINKEEKKENDLREMKKEEDDEKQLKNEPEEVESQCNQENSQPQNNNNNASSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHHQNLTKKENATGSPLPSPSQKPLCDPQSENEQLLNGNTCAAVASKERVEETVVSALT* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6317 366 PANTHER BASIC LEUCINE ZIPPER 34 1 343 - -
Psa5g6317 366 MobiDBLite consensus disorder prediction 1 25 - -
Psa5g6317 366 MobiDBLite consensus disorder prediction 134 151 - -
Psa5g6317 366 MobiDBLite consensus disorder prediction 313 339 - -
Psa5g6317 366 Pfam bZIP transcription factor 215 258 IPR004827 GO:0003700|GO:0006355
Psa5g6317 366 Coils Coil 142 189 - -
Psa5g6317 366 MobiDBLite consensus disorder prediction 312 339 - -
Psa5g6317 366 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 213 265 IPR004827 GO:0003700|GO:0006355
Psa5g6317 366 MobiDBLite consensus disorder prediction 188 210 - -
Psa5g6317 366 Gene3D - 214 313 - -
Psa5g6317 366 SMART brlzneu 211 275 IPR004827 GO:0003700|GO:0006355
Psa5g6317 366 MobiDBLite consensus disorder prediction 134 214 - -
Psa5g6317 366 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 343 - -
Psa5g6317 366 SUPERFAMILY Leucine zipper domain 215 269 IPR046347 GO:0003700|GO:0006355
Psa5g6317 366 MobiDBLite consensus disorder prediction 152 187 - -
Psa5g6317 366 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 218 233 IPR004827 GO:0003700|GO:0006355
Psa5g6317 366 CDD bZIP_plant_RF2 216 266 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6317 Psa-Chr5 537065667 537070521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6317 1 292 bZIP Transcription Factor Family AT3G58120 54.605 2.97e-97 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g6317 bZIP_1 4.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6317 - - cam:101507538 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6317 5 537065667 537070521 Psa5g6317 5 537065667 537070521 ECH