Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6271 ATGGCAATGATGAAGTCTGGTTTCTTCTTGTTCATGTCAATTCTCTTTCTCACCTCTTCATTGTCATATGGTTACAAGTTCAACGTTGGTGGCAAAGATGGCTGGGCTGTGAAACCCTCACAATGGTACAGTCCTTGGGCTCAGAAAAACAGGTTTCAGATCAATGATACACTTTATTTCAAGTATAACAAAGGATCTGATTCAGTGTTGGTGGTAAATAACCAAGACTACAACTCATGCAATACCAGCAATCCAATTCTCAAAATGGACGGTGGAAACTCAATTTTCAAATTTGAGAGGTCAGGTCCTTTTTTCTTCATTAGTGGAAATGTTGAAAATTGCCAAAAAGGTGAGAAGATTATCGTGGTGGTTTTGTCTCCAAACCACCATCGTAAACATCATCATGGTCCATCATCATCACCTTCTCCGGCTGATTTACCGGAGGAGAATACTCATTCACCTAATTCCACCGTTGATAATACTCCGGCGAATTCACCCGCTCCTTCGGGTTCACCTATGTTAAGTGGTTCAATTGGTGTTAGTGTTGGGTTTGCTTTAGTCTTAGGAAGCTTTGTTTTCTAA 582 0.4055 MAMMKSGFFLFMSILFLTSSLSYGYKFNVGGKDGWAVKPSQWYSPWAQKNRFQINDTLYFKYNKGSDSVLVVNNQDYNSCNTSNPILKMDGGNSIFKFERSGPFFFISGNVENCQKGEKIIVVVLSPNHHRKHHHGPSSSPSPADLPEENTHSPNSTVDNTPANSPAPSGSPMLSGSIGVSVGFALVLGSFVF* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6271 193 CDD OsENODL1_like 25 125 IPR041846 -
Psa5g6271 193 PANTHER EARLY NODULIN-LIKE PROTEIN 2 1 142 - -
Psa5g6271 193 PANTHER BLUE COPPER PROTEIN 1 142 IPR039391 GO:0009055
Psa5g6271 193 MobiDBLite consensus disorder prediction 131 170 - -
Psa5g6271 193 Pfam Plastocyanin-like domain 35 117 IPR003245 GO:0009055
Psa5g6271 193 Gene3D - 24 129 IPR008972 -
Psa5g6271 193 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Psa5g6271 193 MobiDBLite consensus disorder prediction 143 170 - -
Psa5g6271 193 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6271 Psa-Chr5 533735130 533736870 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6271 1 193 Phytocyanin Superfamily AT4G28365 42.000 1.11e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6271 - - sind:105165394 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6271 5 533735130 533736870 Psa5g6271 5 533735130 533736870 ECH