Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6255 ATGACGGAGCCTCTGCTGAGAGGCGAAAGCAGTGGATTGAGAAACCGTTCGCGAGGGATAGTCCGCCGCACCGATGCTATCACCTACGGTTCCAACTACGAGAAAGCCGCCGCGCTTATCGATCTGGCTGAAGATGGTGTTGGTATACCTGAGCAACTTCTGGATTCGTCAAACTTTCAAAGTTATTCAAGATTTTATTTTATGTTCACTAAATACAATCTCATCTGGTCTCTTAGTTATTTTGCTCTGATAGTCCTGAATTTCCTGGAGAAACCTCTATGGTGTGAAAAGAATACCACTCATTCTTGCAATGATAGAGAGTATTTCTTTTTGGGACAGTTGCCATATCTAAGTGCTACACAATGTATTATTTATGAGGGAATAATTCTTGTTTTGCTAATCATCCATACTTTCTGGCCTTTATCATACGAAGGGCCCCATATATATTGGAAAAGTCCTATTAATCTATTGAAGGCCTTATGTCTGTTAGTTATCCTTGCTGATATGCTGGCTTATGCTCTGTATATGTCTCCGGTGGCTTTTGATTTTCTTCCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTTGTTCTGAATATTAGGGAGCTACGAGAAACCACCATCATCTTGGCTGGAATGCTTGACACATACTTAAATATCTTGGCTTTGGGGCTTTTGTTTCTTGTTTTTGCGAGTTGGGTGGCTTATGTGATTTTTGAAGATACAATACAAGGGAAAACAGTATTCACTTCCTATACTACAACGTTATATCAGATGTTTCTGTTATTTACCACAGCCAATAATCCAGATGTTTGGGTTCCTGCATACAAGGCTTCGCGTTGGTCTTGCATTTTTTTCATTCTGTTTGTGCTGGTGGGAGTCTACTTTGTTACAAACTTGATCCTTGCCGTTGTTTATGAGAGTTTCAAGAGTGAGCTTGTAAAACAAGTTTTTGAGATGGATCGTATGAGAAGAGCTATGTTGGAGAGAGCTTTTAATCTCCTAGATACATATAATGTTGGATATCTCAACAAAGATCAAATCATTAGGCTCTTTGAGGAGGTGAACAAGTACAGGACTTTGCCAAAAATCTCCAAGGAAGAATTTGAGCTGATATTTGAGGAGCTGGATGACACTCATGATGTAAAGATCAATAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAATTCCAGAAGGAAGATGTGCTTTCTTACTTCGACTATTTAGTATTCTACCATTCACCAACATCAAAGAGGTTGAAAGCTTTCGTAAGGAGCACCATGTTTGGATACATAGTGACCTTTGTACTCATAGTGAATCTGGTTGCCGTAATTATTGAGACAACGCTCGACATAGAAAATAGTTCTGCTCAAAAGGCTTGGCAAATGGCTGAATTCATTTTCGGGTGGATATATGTAATAGAAATGATTTTGAAGGTTTACTCATATGGATTTGAAAACTATTGGTGGGATGGTCAAAATCGCTTTGATTTTGTGATCACAGTGATAATTGTCATTGGAGAAACTATAGATTTTGCTTTTCCCGATGATGCTCTGCCATTTTTCACAAATGGAGAATGGATTCGTTACCTCCTTCTTGCAAGAATGTTGAGGTTGATAAGGCTCCTAATGCATGTCCAGCGATTCCGAAGTTTCGTGGCAACTTTCTTAACTCTGATACCAAGTTTGATGCCATACCTTGGGACCATATTTTGCATCTTGTGTATTTATTGCTCACTTGGTGTCCAGATTTTTGGTGGTCTAGTTAATGCTGGAAACCCAGATTTGGAGGCCACAGACCTTGCTGCTAATGACTATTTACTTTTTAATTTCAATGATTATCCAAATGGAATGGTGGCACTATTCAATTTGCTAGTCTCGGGGATATGGGGAGAATTGATGGAGAGTTACAGAGATTTAACTGGAACTTCTTGGACCCATGTGTACTTCATTAGCTTCTACTTAATTACGGTTTTGCTGCTTTTGAATTTGATTATTGCTTTTGTCTTGGAGGCATTTTTTGCTGAAATAGAGCTTGAGTCATCAGAAACTTGTGATGGAGATGACAAGCTTTATATCCCATTTCTATTTTCAATCTCAATCTAG 2118 0.3862 MTEPLLRGESSGLRNRSRGIVRRTDAITYGSNYEKAAALIDLAEDGVGIPEQLLDSSNFQSYSRFYFMFTKYNLIWSLSYFALIVLNFLEKPLWCEKNTTHSCNDREYFFLGQLPYLSATQCIIYEGIILVLLIIHTFWPLSYEGPHIYWKSPINLLKALCLLVILADMLAYALYMSPVAFDFLPFRIAPYIRVVLFVLNIRELRETTIILAGMLDTYLNILALGLLFLVFASWVAYVIFEDTIQGKTVFTSYTTTLYQMFLLFTTANNPDVWVPAYKASRWSCIFFILFVLVGVYFVTNLILAVVYESFKSELVKQVFEMDRMRRAMLERAFNLLDTYNVGYLNKDQIIRLFEEVNKYRTLPKISKEEFELIFEELDDTHDVKINKDEFADICNAIALKFQKEDVLSYFDYLVFYHSPTSKRLKAFVRSTMFGYIVTFVLIVNLVAVIIETTLDIENSSAQKAWQMAEFIFGWIYVIEMILKVYSYGFENYWWDGQNRFDFVITVIIVIGETIDFAFPDDALPFFTNGEWIRYLLLARMLRLIRLLMHVQRFRSFVATFLTLIPSLMPYLGTIFCILCIYCSLGVQIFGGLVNAGNPDLEATDLAANDYLLFNFNDYPNGMVALFNLLVSGIWGELMESYRDLTGTSWTHVYFISFYLITVLLLLNLIIAFVLEAFFAEIELESSETCDGDDKLYIPFLFSISI* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6255 705 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 693 IPR044581 GO:0005245
Psa5g6255 705 Gene3D - 203 310 - -
Psa5g6255 705 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Psa5g6255 705 SUPERFAMILY Voltage-gated potassium channels 431 677 - -
Psa5g6255 705 Gene3D - 422 556 IPR027359 -
Psa5g6255 705 SUPERFAMILY EF-hand 314 397 IPR011992 -
Psa5g6255 705 Gene3D - 311 394 - -
Psa5g6255 705 Gene3D - 557 694 - -
Psa5g6255 705 Pfam EF-hand domain pair 329 393 IPR002048 GO:0005509
Psa5g6255 705 Pfam Ion transport protein 124 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Psa5g6255 705 Pfam Ion transport protein 431 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6255 1 694 Ion Channels AT4G03560 65.899 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6255 K16900 - gmx:100806160 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6255 5 532311953 532337427 Psa5g6255 5 532311953 532337427 ECH