Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6251 ATGGCTTCAGGACCATCCTTTCTTGGTAACTGCAATTCCGAGGTGCATAATTTCGGTTCCGATGACATCTTTTGTCCCTACGATGACTTTACCAACGAGGATTCTTCTAGCATCACTCACATCGATTCCAGTAAGGATTTTCATGTTTCAAGGATGATGAAAACATCAACATTTCCTGCCACAGTCATTAATACACCTGAAGATAAGTCAATTGGAGAAATGAGATCTGAGTTAACTAGTGATCATGAGGAGGCAGATTCGAAACTCAAATCTCTTGATAAACATCTTCGGGAAGTACACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTAATCGAGACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAAGGATCACCTTCCTCAAATCATTCACAGTCTAAGGAGGAGAAATTTTCGTCTTCTGACATTGATATAAAAGGAGCTGATAATGTGTATGTTACGTCATCTGACCCCCGTAACCAGCAGCTAGCTCTTGCCCTTTCTCATCAGCAGCCTATGGCCTTGCCATCTCAAGCTCCATCCTCAAATGTGACTCAAACCACACAACAACCTCAGTATTACATGCTGCCTCCGCCTTCACCCAATCCGCCAGCAGCAGCCCAACTCCCTCAGAATCAGCATTTTCCTTCTGATCCACAGTATCGATATCATCCATCAACATCATCTCATGTAACCCAGTCCCCGACTGCGCAACAATTTTCTCAGTATCAGCAACCACAACATCAGCAGCAGCAACAGCAATGGCCTCAACAGATGCCTCAGCAGGTGGAGCCTCTGCAACCATCCTCAACGCACTCTCAAATGAGACCCCCATCAGGAAATGCTTACACTCCATACGTTACAAGCCAAGCTCCAAGTCCATCTCCCACGGCCACTGGCAACACATTGTCGAACAGCATGCCAATGCAAAAGCCATATTCAGGGATACCGCCGCAAACCAAGGGCCATTATCCAGCCCAACCAGGTAATCCGTATGGAAGTAGTGAGGTCCATGCTGCACCTCCTCCTGCTAGCGCGTACATGACGAGCGTACGTGAGGGCGGACAAGCAAGTTACCCTACCCAACCTTCTCAATTTGCTCAAACTGGATATCCTCCTCAAAGTGCCTCCCTTCAAAACCATTCACCACATAACCCAACAGTCAGAAATCCTAGCCAGCCGCAACTCATCCGCAGCCATCCTTACAATGAGTTGATTGACAATTTGGTGAATATGGGAGTCAGAGGCGATCTTGTTGTAAGCATTATTCAGAGGATGGAGGAAACTGGGCAGCCTGTGAATTTTAACTCTGTACTTGACAGGTTGAATGCACATAGTTCAATGGGTCCCCAGAGGGGATGGTCAGGGTGA 1383 0.4657 MASGPSFLGNCNSEVHNFGSDDIFCPYDDFTNEDSSSITHIDSSKDFHVSRMMKTSTFPATVINTPEDKSIGEMRSELTSDHEEADSKLKSLDKHLREVHRSVQILRDKQELIETQKELAKLQLAQKGSPSSNHSQSKEEKFSSSDIDIKGADNVYVTSSDPRNQQLALALSHQQPMALPSQAPSSNVTQTTQQPQYYMLPPPSPNPPAAAQLPQNQHFPSDPQYRYHPSTSSHVTQSPTAQQFSQYQQPQHQQQQQQWPQQMPQQVEPLQPSSTHSQMRPPSGNAYTPYVTSQAPSPSPTATGNTLSNSMPMQKPYSGIPPQTKGHYPAQPGNPYGSSEVHAAPPPASAYMTSVREGGQASYPTQPSQFAQTGYPPQSASLQNHSPHNPTVRNPSQPQLIRSHPYNELIDNLVNMGVRGDLVVSIIQRMEETGQPVNFNSVLDRLNAHSSMGPQRGWSG* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6251 460 MobiDBLite consensus disorder prediction 124 146 - -
Psa5g6251 460 MobiDBLite consensus disorder prediction 225 283 - -
Psa5g6251 460 MobiDBLite consensus disorder prediction 173 192 - -
Psa5g6251 460 MobiDBLite consensus disorder prediction 352 396 - -
Psa5g6251 460 MobiDBLite consensus disorder prediction 355 396 - -
Psa5g6251 460 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 68 - -
Psa5g6251 460 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 321 458 - -
Psa5g6251 460 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 68 323 - -
Psa5g6251 460 Pfam UBA-like domain (DUF1421) 406 450 IPR010820 -
Psa5g6251 460 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 68 - -
Psa5g6251 460 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 68 323 - -
Psa5g6251 460 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 321 458 - -
Psa5g6251 460 Coils Coil 105 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6251 Psa-Chr5 532034891 532036940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6251 13 139 Trihelix Transcription Factor Family AT5G14540 26.812 8.81e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6251 - - ccaj:109810355 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6251 5 532034891 532036940 Psa5g6251 5 532034891 532036940 ECH