Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6229 ATGTCTCAACTTCAGCTACTTCCTATTCTTCTTCACATTGTAACCATGATTCTATCTTGTGTTTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCCACAAACATCGACTTATATGGAAATGCAACCATTAACAAATCCATTCTCACTCTCATTAATGGCACTTCACCTTCCTTCGCAATAGCCCGTGCTTTTTACCCTTTTAAAGTACCTACCAAATCACCAAACTCTTCCACTCTTCTCCCCTTTGCTACTTCCTTCATTTTCTCTGTGGCTCCTATTGAAAACTTCATCACAGGACATGGCTTTGCTTTCATATTCACGCCTTCAACAAGTCTAAATGGAACAACATCGACCGAGTATATCGGTCTCCTCAACTACACCAATGAAGGTAATCATAATGACCATATATTCGGAGTAGAATTCGATGTAGTTAAAAACGAAGAATTCGACGATATAAATGATAATCATGTTGGTATCGACATAGACTCTCTTAAATCCGTAACTTCGCAAACGGCTGGCTATTGGGGTGGGAAAGATGGCAAGAAATTTAAAGTGCTCAACATAAAAAGTGGACAAAACTATCAAGTATGGATTGAGTTTATCCAACCTCATCTAAACGTTACGATGGTTCGAGCAGGACAAAAGAGGCCTAATGTGCCTCTTATCAGCAGCACGAATCTTAGCCTTTCTAAGGTTCTCAGCAATGAAACTTATGTTGGATTCTGCGCAGCCAATGGGGTGAAAAAGGATAGTGTTAAGATTCTTGCTTGGAGCTTTAGTAATTTGAATTTTTCAATTGGTGATGCTTTAGTGACATATAACTTGCCTTCATTTGTCCCTTATAAGAGATGGTTTTCTCGAGCAAAAGCCATAGCTGTAGAAGTCGCCGGTGTTTTCTGTGTGTTAATCATTGGTTTCGGTTGTGTAGTGTTTTTTATGCTGTATAGAGGGAAAAGAGGAGAAGAAGAAATTGAAGAGTGGGAACTAGAGTATTGGCCACATAGAATGAGTTTCCAAGAGATTCATGCAGCAACAGGAGGGTTCCCTGAAGAGAATGTGGTTGCTATTGGAGGGAATGGAAAAAGAATCCCTCAAGAAAGAGAAGATGGGATGAGAGAGTTTTTGGCAGAGGTTTCAAGCATAGGAAGAATGAAACACAGAAGTTTAGTAGGATTTAGAGGTTGGTGCAAAGAAGGAAATGGAAACTTGATTCTAGTTTATGACTTCATGAATAATGGTAGTTTAGACAAATGGATCTTTGAGTGTGAAGAAGGAAAGATGCTAACATGGGATGAGAGGATTCAAGTTTTGAAAAACGTAGCCGCGGGGATTCTATACCTACATGAAGGTTGGGAAGTTAAGGTCTTGCATAGGGATATCAAAGCAAGCAATGTTCTACTTGACAAGGACATGAATGCAAGATTGGGAGATTTTGGTTTGGCTCTTATGCATGAGCATCATGGACAAGTGGCCAGCACAACAAAAGTACTAGGGACATTAGGATACATTGCTCCGGAAGTGATTCGAACGGGAAGAGCGTCCACTATGTCTGATGTGTTCGGCTTTGGAATATTGGTGTTGGAAGTAATTTGCGGGCGAAGACCTATTGAAGAACATAAGCTAGGACTAATTGAATCGGTGGAGTCCTTAATGGTGCTGGATCAATTGCACAATGCTGTTGATGAAAGGTTGAAGGACAAAGGAGGATACAACGTTGACGAAGCTGAGAGATTGCTTCATTTGGGTTTGTTGTGTTCGAATCCAGACCCTAGTGTTAGACCAATAATGAGACAGGTTGTGAAAATGTTGGAGGGAGAAAAGGATTGCATTGATTCTGAAGAAGAAAATATGGAGACAAGTTTACTTGGTAGGATAAACTCAGCTGCAATATGGTCTAGAACTGAAAGTGCAGTTCCAAATAGAGATCACCTTACTTTTGAAGAAATTAGAATGTTTAGTTACAATTCTAAAGCGTCTACAAGTGGCTCAAATTCCATTCCAACATCAGATTCAGATGTCATTCGGGACGGCCGGTACACCCATATTCTGTCGTACCGGGAGCTCTCCTTTGTCGCAGCTTCTACAATGACCATAATGGCCATAAACGCACCAACATTACTTTCTTGGATCACTTATATCAAAGAATACAATGAACGGGGAAATCTACCTTTGGATCCATTGAAAGCCATGCTCATAAAGAGAAAGTTCAATGGATATGCGATGGTCGGGGAATCCTATACGAAAGAGGCCTTTCCACCCCTTGCTAAGATACCTAGAAAAGGTGGAGGCCGATTATGCCCTCTTGGAAGTACACGAAGGGAGGAGTTTTCTCTTTAG 2343 0.4055 MSQLQLLPILLHIVTMILSCVSTTEFVYNTNFNSTNIDLYGNATINKSILTLINGTSPSFAIARAFYPFKVPTKSPNSSTLLPFATSFIFSVAPIENFITGHGFAFIFTPSTSLNGTTSTEYIGLLNYTNEGNHNDHIFGVEFDVVKNEEFDDINDNHVGIDIDSLKSVTSQTAGYWGGKDGKKFKVLNIKSGQNYQVWIEFIQPHLNVTMVRAGQKRPNVPLISSTNLSLSKVLSNETYVGFCAANGVKKDSVKILAWSFSNLNFSIGDALVTYNLPSFVPYKRWFSRAKAIAVEVAGVFCVLIIGFGCVVFFMLYRGKRGEEEIEEWELEYWPHRMSFQEIHAATGGFPEENVVAIGGNGKRIPQEREDGMREFLAEVSSIGRMKHRSLVGFRGWCKEGNGNLILVYDFMNNGSLDKWIFECEEGKMLTWDERIQVLKNVAAGILYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLALMHEHHGQVASTTKVLGTLGYIAPEVIRTGRASTMSDVFGFGILVLEVICGRRPIEEHKLGLIESVESLMVLDQLHNAVDERLKDKGGYNVDEAERLLHLGLLCSNPDPSVRPIMRQVVKMLEGEKDCIDSEEENMETSLLGRINSAAIWSRTESAVPNRDHLTFEEIRMFSYNSKASTSGSNSIPTSDSDVIRDGRYTHILSYRELSFVAASTMTIMAINAPTLLSWITYIKEYNERGNLPLDPLKAMLIKRKFNGYAMVGESYTKEAFPPLAKIPRKGGGRLCPLGSTRREEFSL* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6229 780 SUPERFAMILY Protein kinase-like (PK-like) 327 606 IPR011009 -
Psa5g6229 780 ProSiteProfiles Protein kinase domain profile. 329 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6229 780 CDD lectin_legume_LecRK_Arcelin_ConA 24 262 IPR001220 GO:0030246
Psa5g6229 780 SMART serkin_6 350 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6229 780 Gene3D Transferase(Phosphotransferase) domain 1 413 628 - -
Psa5g6229 780 Gene3D Phosphorylase Kinase; domain 1 340 412 - -
Psa5g6229 780 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 262 IPR013320 -
Psa5g6229 780 Gene3D - 22 271 - -
Psa5g6229 780 Pfam Legume lectin domain 24 263 IPR001220 GO:0030246
Psa5g6229 780 Pfam Protein kinase domain 363 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6229 780 PANTHER - 1 668 - -
Psa5g6229 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Psa5g6229 780 PANTHER LECTIN RECEPTOR KINASE 1 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6229 Psa-Chr5 531118524 531123075 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6229 21 553 Receptor kinase-like Gene Family AT4G04960 54.234 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa5g6229 Pkinase 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6229 - - mtr:MTR_2g090410 1009.21